Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0157 ATGATGATGATGACAATGGAGGGAATGATGGATAATAGTGTATTAGATGATGTGATAAGAAGATTATTGGAAGGTAAAGGAGCTAAACAGGTTCAATTATCTGAATCTGAAATTCGTCAACTTTGTGTTAATGCAAGACAAATCTTCCTCTCCAATCCTATTCTTCTTGATCTCTCTCCTCCTATTCGCGTTTGTGGTGATATACATGGTCAGTACCAAGACTTACTGAGGCTGTTTGAATATGGAGGCTACCCTCCTGCGGCGAACTACTTGTTCTTGGGGGATTATGTGGACAGAGGGAAGCAAAGTTTGGAGACTATATGTTTGCTTTTGGCCTACAAAATAAGATATCCGGACAAAATTCATCTCTTGAGAGGAAACCACGAAGATGCGAAGATAAATCGGATTTATGGTTTTTATGATGAATGTAAAAGGAGGTTCAATGTTAGGCTATGGAAGATATTTACTGATTGCTTTAACTGTTTGCCAGTAGCTGCACTCATCGACGGCAAAATACTTTGTATGCATGGGGGTCTCTCTCCGGAATTACAAAATTTGAATCAGATTAAGGAGATTCAAAGGCCTACTGAAATTCCGGATAATGGTCTCCTATGTGATCTGCTTTGGTCTGACCCTGATTCTAGCATTGACGGTTGGGCGGATAGTGACCGAGGTGTTTCATGTAACTTTGGATCTGATGCAGTGACCGAGTTTTTGGATAAAAATGATCTTGATCTCATTTGCAGAGGTCATCAGGTTGTAGAGGATGGATACGAGTTTTTCGCTAAACGAAGATTAGTCACAATATTTTCTGCTCCAAATTATGGCGGGGAGTTTGATAACGCTGGTGCATTATTGAGCGTTGATGAATCTCTTGTCTGCTCCTTCGAGATATTAAAACCTATTGATAGAGGATCTTCATCAAAGATGAATCTTAAGAAGCCTCCTAAACTTGGAAAAGCTTAG 966 0.3986 MMMMTMEGMMDNSVLDDVIRRLLEGKGAKQVQLSESEIRQLCVNARQIFLSNPILLDLSPPIRVCGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDGKILCMHGGLSPELQNLNQIKEIQRPTEIPDNGLLCDLLWSDPDSSIDGWADSDRGVSCNFGSDAVTEFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEILKPIDRGSSSKMNLKKPPKLGKA 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0157 321 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2 317 - -
Lal5g0157 321 Pfam Calcineurin-like phosphoesterase 61 253 IPR004843 GO:0016787
Lal5g0157 321 SMART pp2a_7 33 303 IPR006186 GO:0016787
Lal5g0157 321 SUPERFAMILY Metallo-dependent phosphatases 18 304 IPR029052 -
Lal5g0157 321 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 8 2 317 - -
Lal5g0157 321 ProSitePatterns Serine/threonine specific protein phosphatases signature. 124 129 IPR006186 GO:0016787
Lal5g0157 321 PRINTS Serine/threonine phosphatase family signature 61 88 IPR006186 GO:0016787
Lal5g0157 321 PRINTS Serine/threonine phosphatase family signature 90 117 IPR006186 GO:0016787
Lal5g0157 321 PRINTS Serine/threonine phosphatase family signature 123 147 IPR006186 GO:0016787
Lal5g0157 321 PRINTS Serine/threonine phosphatase family signature 157 183 IPR006186 GO:0016787
Lal5g0157 321 PRINTS Serine/threonine phosphatase family signature 186 213 IPR006186 GO:0016787
Lal5g0157 321 PRINTS Serine/threonine phosphatase family signature 243 263 IPR006186 GO:0016787
Lal5g0157 321 PRINTS Serine/threonine phosphatase family signature 265 281 IPR006186 GO:0016787
Lal5g0157 321 Pfam Serine-threonine protein phosphatase N-terminal domain 15 59 IPR031675 -
Lal5g0157 321 Gene3D - 8 311 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0157 Lal-Chr5 1362527 1365799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0157 56 249 Calmodulin-binding Proteins AT5G63870 32.314 6.18e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0157 K06269 - gmx:100805030 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0157 5 1362527 1365799 Lal5g0157 5 1362527 1365799 ECH
Lal5g0157 5 1362527 1365799 Lal18g0363 18 3087360 3089983 LSH