Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0117 ATGGCTGGGACTAACCAACTTAACCTCAATGACTCCAAGACGGTGGTTCCGCTAAATATGTGGATACTCATTTCCAATTTTAAGTTAGCATACAATCTCCTTCGCCGCCCTGATGGGACTTTCGATCGCCATTTAGCAGAGTTTCTCGATCGAAAAGTTCCAGCCAATGCCAACCCTGTGGACGAAGTGTTCTCTTTTGATGTTATTATTGATCGTGAAACCAATCTCGTAGGTCGAATTTATCGGCCTGCCAAGGAAGAACAACACCATGTGAGTATTGTAGACCTTGAGAAACCTACAACAGCTGAGGTTCTTCCTGTGATCATATTCTTCCACGGTGGAAGCTTTGCACACTCTTCAGCTAATAGTGCTATTTACGATACTCTATGTCGTCGCCTGGTTGGGATTTGTAACTCCGTGGTCGTCTCGGTGAATTATAGACGCGCCCCTGAAAACAGATATCCTTGTGCTTATGATGATGGGTGGAGAGCTCTGAAGTGGGTTAGTTCTCGGTCTTGGCTCCAGAGTATGAAGGATCAGAAAGTTCATATCTACTTAGCCGGTGATAGCTCGGGTGGGAACATCGTTCACCATGTTGCATTGAGAGCAGTCGAATCGGGAATTAAAGTGATGGGTAATATACTGCTGAATCCATTGTTTGGCGGGGAAGCAAGAACCGAATCTGAAAAGCGTCTAGACGGGAGATACTTTGTTAAAATTCAAGATAGAGACTGGTATTGGAAAGCTTTTCTTCCAGAAGGGGAAGATAGAGACCATCAAGCTTGTAACCCTTTTGGCCCTAATGGTAGAAACCTTAAAGGAATTCCCTTTCCCAAAAGCCTCATCGTGGTAGCCGGCTTAGACCTCGTTCAGGATTGGCAATTGGCTTATGCGAAAGGGCTCGAAAAAGCCGATCAAAATGTTAAATTACTGTTCCTGAAGCAAGCAACAATTGGATTTTACTTGTTGCCAAATAATGAGTACTTCTCTATTCTCATGGATGAGGTAAAAGATTTTGTGAGCTATAACTAG 1032 0.438 MAGTNQLNLNDSKTVVPLNMWILISNFKLAYNLLRRPDGTFDRHLAEFLDRKVPANANPVDEVFSFDVIIDRETNLVGRIYRPAKEEQHHVSIVDLEKPTTAEVLPVIIFFHGGSFAHSSANSAIYDTLCRRLVGICNSVVVSVNYRRAPENRYPCAYDDGWRALKWVSSRSWLQSMKDQKVHIYLAGDSSGGNIVHHVALRAVESGIKVMGNILLNPLFGGEARTESEKRLDGRYFVKIQDRDWYWKAFLPEGEDRDHQACNPFGPNGRNLKGIPFPKSLIVVAGLDLVQDWQLAYAKGLEKADQNVKLLFLKQATIGFYLLPNNEYFSILMDEVKDFVSYN 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0117 343 PANTHER GIBBERELLIN RECEPTOR GID1C 3 340 - -
Lal5g0117 343 PANTHER ARYLACETAMIDE DEACETYLASE 3 340 - -
Lal5g0117 343 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Lal5g0117 343 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Lal5g0117 343 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Lal5g0117 343 SUPERFAMILY alpha/beta-Hydrolases 51 340 IPR029058 -
Lal5g0117 343 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0117 Lal-Chr5 1058090 1060811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0117 1 341 Carbohydrate Esterase AT3G05120 73.392 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0117 K14493 - gmx:100815161 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0117 5 1058090 1060811 Lal5g0117 5 1058090 1060811 ECH