Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0105 ATGGAATTTGATAGGCTGGGACCCTCCGATCCAGGTGGCTCTTCCCACCGCTCCACCGCACCTCTCACTAAATCAACCACCAATTCCTCCTCTTCCTCAGGAACCAGTAAAAAGAAACTCACCATACTCACAGTTATCGCCGCCATCTTAATCATTACCTCCGCCGCAATCTCCGCCACTCTTGTCACACTCAACCGCTCAAGAGCTCGAAATCAAACCTCACCGGAGCTTCTCCGCCGCAAACCCACTGAAGCAATCTCAAGAACTTGCAGCAAAACTCGATTCCCAACTCTATGCATTAACTCTCTCCTTGATTTCCCAGGCTCCACAACCGCCACCGAACATGATCTCATCCACATCTCCTTCAACATGACCCTCCGCCACGTCAGCAATGCTTTCTTTGCATCATCTACCCTCACCAACTCCTATCCCGAAACCACGACGATAGACTCGCGCCAGCGTGCTGCATACGAGGACTGTCTCGAGTTACTCGAAGGGTCCACAGACGCGCTGGCACGAGCTCTTACATCGGTCGTGCCGCTCTCAGCAGCAACAACAACAGAAGTAGCTGCTGAACGCGGCTCGACCGATGATGTGATGACGTGGCTCAGTGCTGCGCTCACTAATCATGACACGTGTGAGGAGGGGTTCGAGAATAGTAACGGGTCTGTTAAGGATGAGATGATTAATAATTTGAAGGACTTGTCGGAACTCGTGAGTAATAGTCTCGCGATATATTCCGCGAGTCAAAGAGATGATGACGATTTCTCTGGAGTTCCAATACAGAACAAAAGAAGATTGATGATGAACATAGGAGAAGAAGATAATGATAATTTCCCGAGATGGTTGAATGAACGAGATAGGAAATTGGTGAGTTTATCGGTATCGGAGATTCAAGCGGATATAATCGTGTCAAAGAATGGTAATGGAACGGTGAAGACAATTACTGAAGCAATCAAAAAAGCGCCAGAGCATAGTAATCGCCGATTCATAATTTACGTGAGGGCAGGAAGATATGAAGAGAATAACTTAAAGATTGGAAAAAAGAAAACGAATATAATGTTGATAGGTGATGGAAAAGGAAAAACTATCATCACAGGGAGAAAGAATGTTGCTGATGGCATGACCACATTTCATACTGCAACCTTTGCCGCTAGTGGCGCTGGTTTTGTTGCACGAGACATTACGTTTGAAAACTACGCTGGACCAGAGAAGCACCAAGCAGTGGCTCTCCGTGTTGGAGCTGACCACGCGGTGGTGTATCGATGTAGCGTCATTGGTTACCAAGACACATGTTATGTGCACTCCAACCGTCAATTCTTCCGCGAATGTGACATTTATGGCACAGTTGATTTTATATTTGGAAACGCAGCCGTAGTTTTTCAAAAGTGTAATTTTTATGCTCGCAAACCCATGGCCCAACAAAAAAATACAATCACAGCCCAAAATCGGAAAGACCCGAACCAAAACACAGGTATATCCATCCACGATTGTCGTATCCTACCCGCACCGGATCTTGCTACGGTGAAGGATAGTGTCCCTACCTATTTGGGTCGTCCATGGAAATTGTACTCTAGAACCGTATACTTGTTATCCTACATTGGGGATCATATACATCCCAATGGATGGTTGGAATGGAATGGAGAGTTTGCATTAGACACATTGTATTATGGAGAGTACATGAACTACGGGCCGGGTGCAGCCATAGGACAACGGGTTAAATGGCCTGGATATCGGGTTATCACATCAACTGTGGAGGCTAACAGATTCACCGTGGCTCAATTCATATCCGGTTCGACATGGTTGCCATCCACAGGAGTGGCTTATTTGGCTGGGTTATCCACTTGA 1848 0.4648 MEFDRLGPSDPGGSSHRSTAPLTKSTTNSSSSSGTSKKKLTILTVIAAILIITSAAISATLVTLNRSRARNQTSPELLRRKPTEAISRTCSKTRFPTLCINSLLDFPGSTTATEHDLIHISFNMTLRHVSNAFFASSTLTNSYPETTTIDSRQRAAYEDCLELLEGSTDALARALTSVVPLSAATTTEVAAERGSTDDVMTWLSAALTNHDTCEEGFENSNGSVKDEMINNLKDLSELVSNSLAIYSASQRDDDDFSGVPIQNKRRLMMNIGEEDNDNFPRWLNERDRKLVSLSVSEIQADIIVSKNGNGTVKTITEAIKKAPEHSNRRFIIYVRAGRYEENNLKIGKKKTNIMLIGDGKGKTIITGRKNVADGMTTFHTATFAASGAGFVARDITFENYAGPEKHQAVALRVGADHAVVYRCSVIGYQDTCYVHSNRQFFRECDIYGTVDFIFGNAAVVFQKCNFYARKPMAQQKNTITAQNRKDPNQNTGISIHDCRILPAPDLATVKDSVPTYLGRPWKLYSRTVYLLSYIGDHIHPNGWLEWNGEFALDTLYYGEYMNYGPGAAIGQRVKWPGYRVITSTVEANRFTVAQFISGSTWLPSTGVAYLAGLST 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0105 615 MobiDBLite consensus disorder prediction 1 35 - -
Lal5g0105 615 Pfam Plant invertase/pectin methylesterase inhibitor 85 245 IPR006501 GO:0004857
Lal5g0105 615 Gene3D Invertase/pectin methylesterase inhibitor family protein 83 248 IPR035513 -
Lal5g0105 615 SUPERFAMILY Pectin lyase-like 298 612 IPR011050 -
Lal5g0105 615 Gene3D - 294 613 IPR012334 -
Lal5g0105 615 CDD PMEI-like_3 90 245 - -
Lal5g0105 615 ProSitePatterns Pectinesterase signature 2. 446 455 IPR033131 -
Lal5g0105 615 PANTHER PECTINESTERASE 33 613 - -
Lal5g0105 615 MobiDBLite consensus disorder prediction 12 35 - -
Lal5g0105 615 SMART PMEI_2 81 245 IPR006501 GO:0004857
Lal5g0105 615 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 84 247 IPR035513 -
Lal5g0105 615 Pfam Pectinesterase 301 598 IPR000070 GO:0030599|GO:0042545
Lal5g0105 615 PANTHER PECTINESTERASE 33 613 - -
Lal5g0105 615 TIGRFAM PME_inhib: pectinesterase inhibitor domain 72 246 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0105 Lal-Chr5 979151 984935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0105 1 614 Carbohydrate Esterase AT5G53370 62.237 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0105 - - lang:109330048 1098.96