Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0097 ATGGCATCATCTGATCAACACGACACCGTTTTGGCCGAAGAAGACATTGACGACGACGACGAAGAAGAATCTCACGACGACCTATTACAAGAGGAAGAAGATGAAGAAGACTTAGACGACGACGTTTTACTCGACGATGATGAAAACGATCCTTCCCCTTCCACCACCTCCGTCATCGCCGTCACCATCGCCGTTCCACCTCCGATCTTACCCGCTACAACCACCCCCGACTCAAAACTCCTCCAAATCGAAGAGAAAAAACCGATCGATGATTCTCGTAAACTCTTTCAACGTCTTTGGACCGATGAAGACGAGATCGAACTCTTACAAGGCTTCCTCGATTACACTTCGCATCGAGGATCTTCTCATCATAACGATACTTCTTTGTTCTACGATCAGATTAAATCTAAGTTTCAAATCGATTTCAATAAGAACCAGCTTGTTGAGAAAATTCGAAGGTTGAAGAAAAAGTACCGTAACGTTCTTAACAAAATCAACTCCGGTAAGGAATTTTCATTCAAGAGCCCTCACGATCAAGCAACTTTTGAAATTTCGCGCAAGATTTGGAGCAATATTGGTCAAATCAGTGGTGGTGTTGTTGTTGATGATAATGTGTTGGATGAAGATGAAATCAACCTCAATCCAAATCAAAACCCTAACCATAACCCTAACATTAATCTCAATTTAGTTCAGTCTATGCCAAAATATGAGATGGTGATGATCGGGAATTCATGGGAGAAGAAACCCACGCCGTCAAGGAAGAGGTCACGGCCACGATCGGCAATGATGAGGATCGATGAGAAACCACAGGTTTTGTTTAATCATGGATCAGGATCGGGATTAGGATCGGGATCAGGGTTGAATTTGAATTTGAACAATGATCATAATTGCATTATCAATTCTAACACTGATGCTGCTAATGTTAACAATAATAAGAATTATGAGAATAATTGTAACAGTGAGCAGCAGCATAGTAATAGTGTACCTGGTTTGGTTGAAGAAACTGTTCGGAGTTGTTTGACTTCGGTGTTGAAGGAGTTGATGGGTGGTGGTGTCATGGGAGGAGGATTGTTTGGGGCGAGAGGGTTTGGATCGTTGAATTCGATGCAAATGCCGATGGTGACGCCTTTGAGTTATTTGGGTTTAGGGAGTGGTGGAGATGTGGTGGATGAGAAGTGGAGGAAGCAACAGATTTTGGAGTTGGAAGTGTACGCGAAGCGGTTGGAGTTGGTGCAGGATCAGATCAAGGCTGCTTTGGGGGAGTTGAGATCATCAGGTGGAGGATGA 1287 0.4343 MASSDQHDTVLAEEDIDDDDEEESHDDLLQEEEDEEDLDDDVLLDDDENDPSPSTTSVIAVTIAVPPPILPATTTPDSKLLQIEEKKPIDDSRKLFQRLWTDEDEIELLQGFLDYTSHRGSSHHNDTSLFYDQIKSKFQIDFNKNQLVEKIRRLKKKYRNVLNKINSGKEFSFKSPHDQATFEISRKIWSNIGQISGGVVVDDNVLDEDEINLNPNQNPNHNPNINLNLVQSMPKYEMVMIGNSWEKKPTPSRKRSRPRSAMMRIDEKPQVLFNHGSGSGLGSGSGLNLNLNNDHNCIINSNTDAANVNNNKNYENNCNSEQQHSNSVPGLVEETVRSCLTSVLKELMGGGVMGGGLFGARGFGSLNSMQMPMVTPLSYLGLGSGGDVVDEKWRKQQILELEVYAKRLELVQDQIKAALGELRSSGGG 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0097 428 Pfam Protein of unknown function, DUF573 96 190 IPR007592 GO:0006355
Lal5g0097 428 PANTHER BNAANNG10740D PROTEIN 1 426 - -
Lal5g0097 428 MobiDBLite consensus disorder prediction 11 48 - -
Lal5g0097 428 Coils Coil 144 164 - -
Lal5g0097 428 PANTHER BNAANNG10740D PROTEIN-RELATED 1 426 IPR007592 GO:0006355
Lal5g0097 428 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0097 Lal-Chr5 913069 914355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0097 3 428 GeBP Transcription Factor Family AT5G28040 41.300 6.19e-89 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lal5g0097 DUF573 4e-35 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0097 - - gmx:100779712 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0097 5 913069 914355 Lal3g1499 3 20785407 20786696 LSH
Lal5g0097 5 913069 914355 Lal18g0328 18 2767122 2768438 LSH