Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0095 ATGAATAGTGTGACAGAGATTGAAGAAGATAACAGTTCTGAGTTTGTGGAAGTTGATCCAAGTGGAAGATATGGCAGATACAATGAAATCCTAGGAAAGGGTGCTTTCAAAACAGTATATAGAGCATTTGATGAATATCAAGGGATTGAAGTTGCTTGGAACCAATTGAAACTTTATGATTTTCTTCAAAGCCCTGAAGATCTTGAAAGACTGTACTGTGAAATTCACCTTTTGAAAACATTGAAGCATAGAAATATTATGAAATTTTACACATCTTGGGTGGATATTTCTAATAGGAATATCAACTTTGTTACTGAAATGTTCACTTCTGGTACTCTTAGACAGTATCGGCTAAAGCATAAGAGAGTTAACATCAGAGCTGTGAAGCATTGGTGTAGACAGATCTTAAGAGGACTTCACTATCTTCATAGTCATGATCCCCCTATCATCCATAGAGATCTCAAATGTGATAATATTTTTGTCAATGGAAACCAAGGAGAAGTTAAGATTGGGGATCTCGGCCTCGCAGCAATTCTCCGAAAATCTCATGCTGATCATTGTGTAGGAACACCTGAGTTTATGGCCCCGGAAGTATACGAAGAGGCATATAATGAATTAGTTGACATATATTCCTTCGGGATGTGTGTATTGGAAATGGTTACACTTGAATATCCTTATAGTGAATGTAACCATCCAGCACAAATATACAAGAAAGTTATTTCTGGTAAAAAACCAGATTCTTTGTATAAAGTGAAGGATACAGAAGTGCGAGAATTTGTTGAGAAATGCTTAGCAACCGTGTCACTTAGGCTCTCCGCACGGGAGCTTCTAGATGATCCTTTTCTTCGAAGTGACGATTACGAGTATGATTTAGGGTCAGTAGATGGCAGATCACAGGATCACAGTCCTCTAATAAGTCAGAACCTCTTTCATCTTCATCAGAGCTATGGTAACGTCAACGTTGAATACTCAAATGGCTTTGGCTTTGAAGGAGAATGGTGTAATACTTCAGCCGAGATTGAACCTAGTGGAATTGAACTTTTTGAGTGCCATGACGATGAAGAACCCTCTGAAGATGTTGACATAAGCATCAAAGGCAAGAGGCATGATGATAACGGTGGCATCTTTTTGAGACTAAGAATTGCCGATAAAGAAGGCCGTATACGGAATATTTATTTCCCATTTGATATAGAGATGGACACAGCGATAAGTGTAGCATCTGAAATGGTTGTGGAACTCGACATTACCGATCAGGATGTTACCAGAATAGCGGATATGATAGATGGTGAAATTGCTTCCTTGGTTCCCAAATGGAGGCCGGAATCAGGAATCGAGGAAATACCCAAGTTTGCAAATCAACGGTTCTGTCAGAATTGCATGTCTAATCATACTTCCAGTGGCTCTCTTATGGATTTTCTTTCACATGATCAAGATGGAAAGACCATACAATTTCTTCATTGCCATGGATGTGCTTCAATGCATGGTCGGTTTGAGGAGATTACGTTCCAATCCGACGAGTGTGACAAATATGTTGGAGAGGATGCACCTAATGTTTCAACCAAATCACAATGCTTGCAGTATTTGGAGTTATGGAATCAGCACGAAAGTCGTGAACTGAGTCCAATAGAGTCTAATCGAAGCCATTCTGACAAACATTTACATAAATCAGTATTAGCAGATGACCAAGGACAGAATGTTTGGGAAAACAAGTTAGCTCCCAATGCGCAAAACTCCTTAAGAGATCTACCAGGAACTCGCTACTTCCCTACTATCCGTTCCTTACATTGCGGCATTGAGGACGGGTATGAGAAAGAGAGTACAACAAGAACTGAGATGATGGCTAAGAGCAAAATACAAAATGGAGTTAAGGGTACTTAA 1878 0.3946 MNSVTEIEEDNSSEFVEVDPSGRYGRYNEILGKGAFKTVYRAFDEYQGIEVAWNQLKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDISNRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILRGLHYLHSHDPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHADHCVGTPEFMAPEVYEEAYNELVDIYSFGMCVLEMVTLEYPYSECNHPAQIYKKVISGKKPDSLYKVKDTEVREFVEKCLATVSLRLSARELLDDPFLRSDDYEYDLGSVDGRSQDHSPLISQNLFHLHQSYGNVNVEYSNGFGFEGEWCNTSAEIEPSGIELFECHDDEEPSEDVDISIKGKRHDDNGGIFLRLRIADKEGRIRNIYFPFDIEMDTAISVASEMVVELDITDQDVTRIADMIDGEIASLVPKWRPESGIEEIPKFANQRFCQNCMSNHTSSGSLMDFLSHDQDGKTIQFLHCHGCASMHGRFEEITFQSDECDKYVGEDAPNVSTKSQCLQYLELWNQHESRELSPIESNRSHSDKHLHKSVLADDQGQNVWENKLAPNAQNSLRDLPGTRYFPTIRSLHCGIEDGYEKESTTRTEMMAKSKIQNGVKGT 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0095 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Lal5g0095 625 Gene3D Phosphorylase Kinase; domain 1 8 106 - -
Lal5g0095 625 Pfam Protein kinase domain 28 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0095 625 SMART serkin_6 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0095 625 Gene3D - 352 439 - -
Lal5g0095 625 Gene3D Transferase(Phosphotransferase) domain 1 108 289 - -
Lal5g0095 625 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 608 - -
Lal5g0095 625 CDD STKc_WNK 23 282 - -
Lal5g0095 625 SUPERFAMILY Protein kinase-like (PK-like) 28 283 IPR011009 -
Lal5g0095 625 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 376 430 IPR024678 GO:0004674|GO:0005524
Lal5g0095 625 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 608 - -
Lal5g0095 625 ProSiteProfiles Protein kinase domain profile. 25 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0095 Lal-Chr5 901125 904419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0095 1 500 MAP Kinase Kinase Kinase AT3G22420 57.143 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lal5g0095 Pkinase 5.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0095 K08867 - gmx:100775959 978.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0095 5 901125 904419 Lal5g0095 5 901125 904419 ECH
Lal5g0095 5 901125 904419 Lal12g0617 12 4477871 4481295 PCT
Lal5g0095 5 901125 904419 Lal13g0689 13 4463459 4467097 PCT
Lal12g0617 12 4477871 4481295 Lal5g0095 5 901125 904419 PCT
Lal13g0689 13 4463459 4467097 Lal5g0095 5 901125 904419 PCT