Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0082 ATGTCAACTTTCTCTTATGCTAATGGTTCCAAAAAATCCAAATTTTCACACACTTGTAACCTCTTGAGCCAGTTTTTGAAGGATAAACATAGTTCTTCTTCTTTAGGCCTTGGAATAATGAGTACAAAAATGGAATCCAAAGCAACTAATAGTACTATGGATTTGTTAACCAATCTACAAAGTTCAAGACAAAAAGATGCTTCAAATTTGGAATTATTTCCAAGTTTTATGGAAAATCCATGCATCAATGAATCTAACCTAAGGTCATTCACTCCTGAGACTTCCCAATTGACAATATTCTATGCCGGAAAAGTATTAGTAATCGATGCTTTTCCGGAAAAGAAAGCAACAGAGGTTATCGAGTTAGCTAACAACTTAGCCTCTAACCAATCAAGCAGCAATAAAAATCCTCCTTGTGCTACCATTGCTACTGAAAATTTGAACATTATCAAAGTTTCCAAAACAAACACTTCTCAGTTACGACAAGTTTTTTGTTCAAATATGAGAATCCCAAGGAGAGGTTCACTACTAAAATTCCTTGAGAAGAGAAAAGAAAGGGTCATTGCTAGAAGACCATACCAAATGAACAATCCCAAACAAGAGGGAAACAATGCAAAACATTACTCTGAAGATCAATATTCTTCCACAAGCTTTGATCTTAACTTATAG 669 0.3453 MSTFSYANGSKKSKFSHTCNLLSQFLKDKHSSSSLGLGIMSTKMESKATNSTMDLLTNLQSSRQKDASNLELFPSFMENPCINESNLRSFTPETSQLTIFYAGKVLVIDAFPEKKATEVIELANNLASNQSSSNKNPPCATIATENLNIIKVSKTNTSQLRQVFCSNMRIPRRGSLLKFLEKRKERVIARRPYQMNNPKQEGNNAKHYSEDQYSSTSFDLNL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0082 222 Pfam tify domain 92 124 IPR010399 -
Lal5g0082 222 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 10 212 IPR040390 -
Lal5g0082 222 Pfam Jas motif 172 194 IPR018467 -
Lal5g0082 222 MobiDBLite consensus disorder prediction 196 222 - -
Lal5g0082 222 ProSiteProfiles Tify domain profile. 90 125 IPR010399 -
Lal5g0082 222 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 10 212 - -
Lal5g0082 222 SMART tify_2 90 125 IPR010399 -
Lal5g0082 222 MobiDBLite consensus disorder prediction 190 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0082 Lal-Chr5 817855 819579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0082 10 206 Tify Gene Family AT1G19180 35.556 9.36e-25 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lal5g0082 tify 4.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0082 K13464 - gmx:100778559 193.741