Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0079 ATGTGGTGGAGATCAGCATCTTTTATCATGGACCGAAAACAGAACCGTATTCAAAACGACGTCGTCTCAATGGAAAACGACGACAACAACCCTTCCAACACCAACATCTCCGCTTACTACCAAACCAGGGCGGCGCACAACGCCGTCGTCACCACCGATTGGCTCGCGCAATCTCAGGCTGCTGCCGCCGCCGCCGCCGTTGCTGAAACAAGTGACGGTGAAATTGAAGGTGGAAAACTCGACGTGGTGTCGAATTCTGATAAAGCGTTGAGTGTGATTGATGTGTTTAATGGTTGGCGGAAACAACCTCATTTGGCGGAAGCTGTTGCTGCTATTCGCGCATTGGCTTCTGTTATTAGGTCAAGCAATGCTACCACTATGATGGAGCTCGAAATTGAGCTCAAGAAGGCTTCTGATTCTCTCAAATCGTGGGATGCAACCTCTATCTCTTTGACAGCAGGGTGTGACCTGTTTATGCGATATGTAACAAGAACTTCTGCTTTAGAATATGAAGACTTTAACTCAGCTAAATCTCGCTTAATTGAACGTGCCGAGAAGTTTGGGGAAATCTCATACAAGGCTCGGAAAATTATTGCAATGTTGAGTCAAGAATTTATATTTGATGGCTGCACTATTTTGGTTCATGGTTTTTCTAGAGTTGTATTGGAAATACTAAAACTAGCAGCGCAAGATAAGAAACTGTTCCGGGTCTTCTGCACAGAAGGAAGACCAGATCGAACAGGATTACGGCTCTCCAATGAGCTGGCCAAGCTTGATGTTCCTGTGAAACTTCTGATAGACTCTGCCGTGGCATATTCTATGGACGAGGTGAATATGGTTTTTGTGGGTGCAGATGGAGTTGTTGAAAGTGGGGGTATAATTAACATGATGGGGACATACCAAATTGCATTGATTGCACACAGTATGAATAAACCGGTTTATGTGGCTGCTGAAAGCTACAAGTTTGCTCGTCTTTACCCTCTTGACCAAAAGGATTTGGCCCCGGCATTGCGCCCTATTGATTTCGGTGTGCCGATTCCATCCAAGGTTGAGGTTGAAAGGTCTGCCAGGGATTACACTCCTCCTCAATATCTCACTCTGCTTTTCACTGATTTAGGTGTTCTTACTCCATCAGTGGTTAGTGATGAACTCATCCAGCTATACTTATAG 1170 0.4521 MWWRSASFIMDRKQNRIQNDVVSMENDDNNPSNTNISAYYQTRAAHNAVVTTDWLAQSQAAAAAAAVAETSDGEIEGGKLDVVSNSDKALSVIDVFNGWRKQPHLAEAVAAIRALASVIRSSNATTMMELEIELKKASDSLKSWDATSISLTAGCDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKARKIIAMLSQEFIFDGCTILVHGFSRVVLEILKLAAQDKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYSMDEVNMVFVGADGVVESGGIINMMGTYQIALIAHSMNKPVYVAAESYKFARLYPLDQKDLAPALRPIDFGVPIPSKVEVERSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0079 389 Gene3D - 88 190 IPR042528 -
Lal5g0079 389 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 35 389 - -
Lal5g0079 389 SUPERFAMILY NagB/RpiA/CoA transferase-like 105 388 IPR037171 -
Lal5g0079 389 Pfam Initiation factor 2 subunit family 104 377 IPR000649 GO:0044237
Lal5g0079 389 Gene3D - 193 389 IPR042529 -
Lal5g0079 389 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 35 389 - -
Lal5g0079 389 Coils Coil 127 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0079 Lal-Chr5 796156 799708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0079 1 389 Eukaryotic Initiation Factors Gene Family AT1G53880 75.312 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0079 K03239 - gmx:100808764 606.29