Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0075 ATGGATGACACTTCTCCAATATCATCTGATAATTTAGTTGAATCTCCAGTAATTGAAGTAACAACCAAAATCATGATCATTGGTGTAATAATCTTATTCATTGTTGCTGTATTCTGTCTTTTCCTCTACCTATATGCAAAATTCTGTTTATGCATTGGTGAAGAAACAACTACTCCTAGCTCACACCACCGCCACCGCCGCCACCGCCACCGCCGCTTTGTCTTTGCCCCTGGCCAAGATGGTGCCCTTAGAAAGGGACTTGACCCTTTAGTGCTTAGGTCACTGCCCATATTGGTTTTCCAATCTCAAGAGTTTAAGGATGGTTTGGAATGTGCAGTTTGTTTATGTGATGTTGTTGAAGGAGAAAAAACAAGACTTTTACCTAAATGCAATCATGGGTTTCATCTAGATTGTATTGATATGTGGTTCCAATCACATTCTACATGTCCTCTTTGTAGGTACCCTATTGATTCTTATAGTAGTTCACATCATGAACAAAATGCCTTAGAAAATTCTCCAAATTTTCCCATAAATGTCCTTATTTGGGGTAACCAAACTCAAGTTAGTTCTATTGGTACTCTTTTAGAAGAAAATAGTAGTAGTACTAGTTCAAGTACTAGTTCAAGTACTAGTACTAGTTCAAGTACTAGTACTAGTACTAGTTCAAGTAATCGACATGATGGAATGTTGGTGATTGATATACCAAGTGAGGTATCTTCATCCTGTATATTAGGTTCTGCAAGCAGAATTGGTGAAGATGATTTGAAATCGCCGATATCGGCGAAGCTGAGATCATTGAAGAGGATTTTGAGCAGGGATAGAAGGTTATATCCTATGAGTCCTAGTCATGTAGATGTTGAACAAGAAGGGGAAGAAGCATAG 882 0.3832 MDDTSPISSDNLVESPVIEVTTKIMIIGVIILFIVAVFCLFLYLYAKFCLCIGEETTTPSSHHRHRRHRHRRFVFAPGQDGALRKGLDPLVLRSLPILVFQSQEFKDGLECAVCLCDVVEGEKTRLLPKCNHGFHLDCIDMWFQSHSTCPLCRYPIDSYSSSHHEQNALENSPNFPINVLIWGNQTQVSSIGTLLEENSSSTSSSTSSSTSTSSSTSTSTSSSNRHDGMLVIDIPSEVSSSCILGSASRIGEDDLKSPISAKLRSLKRILSRDRRLYPMSPSHVDVEQEGEEA 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0075 293 MobiDBLite consensus disorder prediction 195 227 - -
Lal5g0075 293 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 91 162 IPR013083 -
Lal5g0075 293 SUPERFAMILY RING/U-box 91 159 - -
Lal5g0075 293 Pfam Ring finger domain 110 153 IPR001841 -
Lal5g0075 293 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Lal5g0075 293 PANTHER RING-H2 FINGER PROTEIN ATL3 8 288 - -
Lal5g0075 293 SMART ring_2 111 152 IPR001841 -
Lal5g0075 293 CDD RING-H2_EL5_like 110 153 - -
Lal5g0075 293 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 8 288 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0075 Lal-Chr5 763410 764291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0075 19 274 C3H Transcription Factor Family AT1G53820 38.095 1.32e-55 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0075 - - lang:109329488 394.045