Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0071 ATGAGATTTCTCATAATAATATCATTGGTTTTGTCTTTGTTCTTTGTTGAATCCTCATGTTGTAACCAAGTTGATAGAGACTCACTTTTAGCTTTCTCAAGTAATATATCCTCTTACCCTTCTCTTAATTGGTCTGTTTCTATTGATTGTTGCCTTTGGGAAGGGATAGTATGTCATAATATTAAGGACCATTTAAGGGTTGTTCAAGTTTTGCTTCCATTTAGAGGTCTTAATGGATTCATCAATCCATTTTCAATCACAAATCTCACTGCTTTATCTCATCTTAATCTGTCACATAATCAATTATCTGGTAATCTACCAAACCATTTTTTCTCACTTCTTAATCACTTGCAAGTTGTTGATTTAAGCTATAATCATTTCTATGGTGAATTGCCACCTTTTGTTGTTGGAAATGGTATTGTTATGAAGGAGTTGGATTTGTCTAGTAACTTTTTCAATGGAACACTTGAGCAATTTGAAGTAGCAGAAACAATGAATTTGTCTAGTTTGATGTATTTTAATGTTAGTAATAATAGCTTCACAGGTAGAATTCCAACTTCACTTTTTTGTGAAAAAAAGCACTTTTCCTCTCTTAGATTCTTGGATTATTCCTCCAACAAATTCTTTGGTGAGATTCTTCCTGGATTAGGAGCATGTTCCAAACTTGAGAAATTTAGAGCTGGTTTTAATAATCTATCAGGAACTCTTCCTAGTGATATTTTCAATACTGTTTCTCTCAAAGAAATATCATTGCCTAGGAATAATCTCTATGGTTCAATTGATGATGGAATTGTAGGACTTACCAACCTTACAATTTTGGAACTAGATTCCAATAATTTCACAGGTCCTATTCCCTTGGATATTGGAAAGCTCTCGAAATTGGAACAGCTACTTCTTCATGTTAATAAGCTAAATGGTACATTGCCACAATCTCTTATGAACTGTGCCAACCTTGTTGTGTTGAATTTAAGGGTCAATTCCTTTGAAGGAAATCTCTCAGCACTGAATTTGTCTAGGCTCGTTAAACTTACTACACTCGATCTCGGCGATAATCATTTCGTTGGTGTTTTTCCACCAACCCTTTATGCATGTAAGTCACTTAGAGCAGTAAGGCTAGCTTTTAATAAGCTTGAGGGACAAATTTCGCATGACATACTTGGACTTGAGTCTTTGTCTTTCCTATCGATTTCTACCAACAAATTGAGCAATGTCACGGGCGCATTGAGGATACTCACGGGACTTAAGAACCTTACCACCCTTATGCTCTCGAAGAATTTCTTCAATGAAGTGATTCCGAATATGATAGACTCGAAAGGGTTCCAAAATATACAAGTTCTAGGATTGGGCGGATGTAATTTCACAGGTGAAATACCGAGGTGGCTTGGTAATATGAAAAAGCTGGAGGTGTTGGATCTTTCTTACAATCGAATTAGAGGTTCGATTCCTCCTTGGTTGGACTCACTTCCTCAGCTTTTCTACATAGACTTGTCTGTTAACATCCTTACAGGAACAATTCCAATGGAGCTCACAAGGCTTCCGGCGTTAACATCACAACAGGCAAATGATAAAATAGAAAGGACTTATTTGGAGTTACCCGTTTTCGCTAATGCCAACAATGTTTCACTGCTGCAATATAATCAACTTTCCAAACTACCGCCAGCGTTATACCTCGGAAACAATAGCCTCGATGGAAGCATCCCGGGCGAGATTGGAAGATTGAAAGTCCTTCATCAACTGGACCTCAGTAACAACAATCTCTCTGGAAGTATCCCAGTTCTGTTATCTAACTTGACTAACTTAGAGAAACTATACCTCTCAGGAAACCGATTATCCGGTGAAATTCCTGGTTCACTCAATAACCTGCATTTTCTGTCTGATTTCAGTGTAGCAAACAATGATCTTCAAGGACAGATACCAAATGGTGCTCAATTTGACACTTTTCCTCCATCCAACTTCGAAGGAAACCCGCGGTTGTGCGGTTTATCCATTCAGCGCCCGTGTCGTCCACAACAAGGTAGTACTGCAGGTGGTCACAGAACAAACAAGAGACTAAAAATTGGATTTGTCATTGCAGCCTGTTTTGGAATTCTTTCCTTCATTGCAGTGTTGATAGTGTGGATAATATCCAAGAGGAGAATCAATCCTCGGGGAGACCCCGACAAGATTGAACCGGAATCAATTTTTGATAACTCCAATAGTGGGATTCATCCTGAGATTGACAAAGATGCTAGCCTAGTCGTGCTGTTCCCGAATAATACAACTGAAATCAAGGATCTTAGCATACTTGAAATACTAAAAGCCACTGAGAATTTCAATGAGGCGAATATTGTTGGATGTGGAGGTTTCGGTTTGGTTTACAAAGCGACATTACCGGATGGAACTACCGTAGCCATCAAGAAACTCTCCGGGGATTTAGGACTTATGGAAAGGGAATTTAAAGCAGAAGTGGAGGCTTTGTCAACAGCACAACATGAGAATCTGGTTGCATTACAAGGCTATTGTGTCTACGGCGGCATTAGGCTTCTCATTTACAATTACATGGAAAATGGAAGTTTGGATTACTGGTTGCATGAAAAAGATGAGGGTCCATCTCAGCTTGATTGGCATACTAGGCTCAAAATCGCACAAGGTGCAAGCCTTGGTTTGGCTTACATGCATCAGATATGTGAACCACACATAGTTCATCGCGATATAAAATCGAGCAACATTCTTCTCAATGAAAAGTTCGAGGCCCATGTTGCTGATTTTGGCTTGTCCAGGTTGATACTTCCTTATCAGACTCATGTTACAACTGAACTTGTAGGTACATTAGGTTACATTCCTCCCGAGTATGGACAAGCGTGGGTGGCGACTCTACGAGGAGATATCTATAGCTTTGGTGTTGTAATGCTTGAGCTTCTCACCGGGAAGAGGCCTATCGATGTATGCAAGCCAAAAATGTCAAGGGAATTGGTTGGTTGGGTGCAACAATTGAGGAGTGAAGGAAAACAAGATGAATTGTTTGATCCACTTCTTAGAGGAAATGGTTTTGAAGAAGAGATGTTGCAGTTTCTTGATGTAGCATGCATGTGTGTTAACCAGAACCCTTTCAAGAGACCAAGCATCAAAGAAGTTGTTGAATGGTTGAAGAATGTTGGATCAAACAACCAGCATAGGAATAAAGACTAG 3168 0.3927 MRFLIIISLVLSLFFVESSCCNQVDRDSLLAFSSNISSYPSLNWSVSIDCCLWEGIVCHNIKDHLRVVQVLLPFRGLNGFINPFSITNLTALSHLNLSHNQLSGNLPNHFFSLLNHLQVVDLSYNHFYGELPPFVVGNGIVMKELDLSSNFFNGTLEQFEVAETMNLSSLMYFNVSNNSFTGRIPTSLFCEKKHFSSLRFLDYSSNKFFGEILPGLGACSKLEKFRAGFNNLSGTLPSDIFNTVSLKEISLPRNNLYGSIDDGIVGLTNLTILELDSNNFTGPIPLDIGKLSKLEQLLLHVNKLNGTLPQSLMNCANLVVLNLRVNSFEGNLSALNLSRLVKLTTLDLGDNHFVGVFPPTLYACKSLRAVRLAFNKLEGQISHDILGLESLSFLSISTNKLSNVTGALRILTGLKNLTTLMLSKNFFNEVIPNMIDSKGFQNIQVLGLGGCNFTGEIPRWLGNMKKLEVLDLSYNRIRGSIPPWLDSLPQLFYIDLSVNILTGTIPMELTRLPALTSQQANDKIERTYLELPVFANANNVSLLQYNQLSKLPPALYLGNNSLDGSIPGEIGRLKVLHQLDLSNNNLSGSIPVLLSNLTNLEKLYLSGNRLSGEIPGSLNNLHFLSDFSVANNDLQGQIPNGAQFDTFPPSNFEGNPRLCGLSIQRPCRPQQGSTAGGHRTNKRLKIGFVIAACFGILSFIAVLIVWIISKRRINPRGDPDKIEPESIFDNSNSGIHPEIDKDASLVVLFPNNTTEIKDLSILEILKATENFNEANIVGCGGFGLVYKATLPDGTTVAIKKLSGDLGLMEREFKAEVEALSTAQHENLVALQGYCVYGGIRLLIYNYMENGSLDYWLHEKDEGPSQLDWHTRLKIAQGASLGLAYMHQICEPHIVHRDIKSSNILLNEKFEAHVADFGLSRLILPYQTHVTTELVGTLGYIPPEYGQAWVATLRGDIYSFGVVMLELLTGKRPIDVCKPKMSRELVGWVQQLRSEGKQDELFDPLLRGNGFEEEMLQFLDVACMCVNQNPFKRPSIKEVVEWLKNVGSNNQHRNKD 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0071 1055 ProSiteProfiles Leucine-rich repeat profile. 466 489 IPR001611 GO:0005515
Lal5g0071 1055 Pfam Leucine Rich Repeat 92 112 IPR001611 GO:0005515
Lal5g0071 1055 Pfam Leucine rich repeat N-terminal domain 25 58 IPR013210 -
Lal5g0071 1055 Gene3D Ribonuclease Inhibitor 24 141 IPR032675 -
Lal5g0071 1055 SMART LRR_typ_2 340 364 IPR003591 -
Lal5g0071 1055 SMART LRR_typ_2 388 410 IPR003591 -
Lal5g0071 1055 SMART LRR_typ_2 414 437 IPR003591 -
Lal5g0071 1055 SMART LRR_typ_2 267 291 IPR003591 -
Lal5g0071 1055 SMART LRR_typ_2 573 596 IPR003591 -
Lal5g0071 1055 SMART LRR_typ_2 167 191 IPR003591 -
Lal5g0071 1055 SMART LRR_typ_2 89 113 IPR003591 -
Lal5g0071 1055 SMART LRR_typ_2 464 488 IPR003591 -
Lal5g0071 1055 SMART LRR_typ_2 114 138 IPR003591 -
Lal5g0071 1055 SMART LRR_typ_2 597 621 IPR003591 -
Lal5g0071 1055 Gene3D Ribonuclease Inhibitor 335 674 IPR032675 -
Lal5g0071 1055 Gene3D Transferase(Phosphotransferase) domain 1 847 1055 - -
Lal5g0071 1055 PRINTS Leucine-rich repeat signature 576 589 - -
Lal5g0071 1055 PRINTS Leucine-rich repeat signature 597 610 - -
Lal5g0071 1055 SMART serkin_6 771 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0071 1055 ProSiteProfiles Protein kinase domain profile. 771 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0071 1055 ProSitePatterns Serine/Threonine protein kinases active-site signature. 893 905 IPR008271 GO:0004672|GO:0006468
Lal5g0071 1055 ProSiteProfiles Leucine-rich repeat profile. 575 597 IPR001611 GO:0005515
Lal5g0071 1055 SUPERFAMILY L domain-like 56 187 - -
Lal5g0071 1055 Gene3D Ribonuclease Inhibitor 233 334 IPR032675 -
Lal5g0071 1055 SUPERFAMILY RNI-like 144 511 - -
Lal5g0071 1055 SUPERFAMILY Protein kinase-like (PK-like) 754 1042 IPR011009 -
Lal5g0071 1055 Gene3D Phosphorylase Kinase; domain 1 738 846 - -
Lal5g0071 1055 Pfam Protein kinase domain 772 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0071 1055 ProSitePatterns Protein kinases ATP-binding region signature. 777 800 IPR017441 GO:0005524
Lal5g0071 1055 PANTHER OS02G0155400 PROTEIN 8 1043 - -
Lal5g0071 1055 Pfam Leucine rich repeat 555 610 IPR001611 GO:0005515
Lal5g0071 1055 Pfam Leucine rich repeat 442 499 IPR001611 GO:0005515
Lal5g0071 1055 SUPERFAMILY L domain-like 440 659 - -
Lal5g0071 1055 Gene3D Ribonuclease Inhibitor 142 232 IPR032675 -
Lal5g0071 1055 ProSiteProfiles Leucine-rich repeat profile. 599 621 IPR001611 GO:0005515
Lal5g0071 1055 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 1043 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0071 Lal-Chr5 736821 739988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0071 3 705 Miscellaneous Gene Families AT1G17240 50.836 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lal5g0071 Pkinase 1.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0071 - - gmx:100782574 1566.21