Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0069 TCACAAAAGAATGGGTCATCATTTGGGGTAACCAAAGGTTCATTTGTGAGTGGGAGGAAAATGAAAGTGAAAAAGTACAAAACAGCAGTTGGAGGAAAATCAAGTACTACAGTTTGTGTAGCAGTTGAACCTGATAGACCATTGTGGTTCCCAGGCAGCATCCCTCCTCCATGGCTTGATGGCACTCTCCCTGCAGACTTTGGCTTTGATCCTCTTGGTCTTTCATCTGATCCTGAGAGCCTAAGATGGAATGTTCAATCAGAGTTAGTACACTGCAGATGGGCAATGTTAGGAGCTGCAGGAATTTTCATTCCAGAATTTCTAACAAAGATTGGTATCTTAAACACACCTTCATGGTACACAGCAGCAGAACAAGAATACTTCACAGACACTACAACACTCTTCATAGTTGAACTCTTTTTCATTGGTTGGGCAGAGGGTAGAAGATGGGCTGATATCATTAAACCAGGAAGTGTTAACACTGACCCTATTTTCCCTAACAACAAGCTCACAGGGACTGATGTTGGTTACCCTGGTGGCCTTTGGTTTGACCCTCTTGGATGGGGAAATGGTTCTGCTCAGAAGCTTAAGGAATTGAGAACAAAGGAGATTAAGAATGGAAGATTGGCTATGTTGGCTGTTTTTGGTGCTTGGTTTCAGCACATTTACACTGGAACTGGTCCTATTGATAACCTCTTTGCACACCTTGCTGATCCTGGTCATGCTACTGTTTTTGCTGTAAGTTTAACCAACAACACCTAG 762 0.4291 SQKNGSSFGVTKGSFVSGRKMKVKKYKTAVGGKSSTTVCVAVEPDRPLWFPGSIPPPWLDGTLPADFGFDPLGLSSDPESLRWNVQSELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAAEQEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGNGSAQKLKELRTKEIKNGRLAMLAVFGAWFQHIYTGTGPIDNLFAHLADPGHATVFAVSLTNNT 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0069 253 Gene3D Chlorophyll a/b binding protein domain 56 241 - -
Lal5g0069 253 SUPERFAMILY Chlorophyll a-b binding protein 45 247 - -
Lal5g0069 253 Pfam Chlorophyll A-B binding protein 55 221 IPR022796 -
Lal5g0069 253 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 10 247 IPR001344 GO:0009765|GO:0016020
Lal5g0069 253 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 10 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0069 Lal-Chr5 724793 726269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0069 29 247 Chloroplast and Mitochondria Gene Families AT3G61470 85.388 5.58e-142 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0069 K08908 - gmx:100802138 468.003