Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0067 ATGATGATGGAGTTTATGGGACCCACAAGATTGATCGGAGATTACATAGTGGGACCCAAAATCGGTTCAGGTTCATTCGCAGTTGTGTATCGTTCAACACACAGACACACTGGTTTGGAGTATGCAATTAAAGAGATTCATAAGAAACAACTTTCTCCAAAAGTCAATGAAAGTCTTTTCAAAGAAATTTCTATTCTTAGTACTATCAATCATCCCAACATCATTCGTCTCTTCCAAACTATCCAAACCAATGACAGGATTTACCTTGTTTTGGAGTATTGTGGTGGTGGTGATCTCGGGGCTTACATTCATCGGCATGGCAAAGTCTCGGAGGCCACTGCGAGGCATTTCATGACGCAATTGGCTGCAGGGTTGCAGGTGCTTCAGGAAAAGCACCTTATTCACCGAGATTTAAAACCACAGAACTTACTATTGACAAGTACTTCAGCTACACCACTCTTGAAAATAGGGGATTTCGGTTTTGCGAGGTATGATGGTATCGGAGGAGATCCAACATACGTGAGCTATGTCATATGTAACTCATGCCACCTGACTACAAAGCTTTGTACTAGGTCTCTAACACCTCAAGGGTTGGCTGAAACACTATGTGGTTCACCATTGTACATGGCTCCAGAGATAATTCAAAACTATAAGTATGATGCCAAGGCTGATTTATGGAGCGTAGGGGCAATATTGTTCCAACTAGTGACCGGGAGGCCACCATTTCAAGGAAATAGCCAATATGAGCTTTTTCAAAACATTTTGAAATCCACTGAACTTCGGTTTCCTCCATCGGCTTTAAAAGAGCTACATTCTGATTGCTTGGATCTTTGCAGAAGCCTTTTACGTCAAAACCCAGTTGAGCGATTAACATTCAAGGAGTTCTTCAATCACAATTTCCTACAGGAAACCAGGTCAATCATGCATGTTGAGCAACCTTCATTGCATCCACCAGTTATATCTATGGTTCAGCAAGTAGTTATCTCTGCTACGGACAAGGTATCTCAATCGCATTATGCGCATCGTTTAAAGTCATTTCTAGATGATTCAAATGTAGATATTTCACCTCCCGATGAGATCATGCTGTTTCAAAGAAGCAATGACAAGAGAACGGCTTGCGGTAAAAGTGCGCTAGAGTTATCTCCAACTATTGTATCTGATAAGCTTGGGAAGTGTATTCATGACAGTCTTCATTTTTCGAAACAACCTGAAGTTTCTGATTTAATGGAGTCCATTGAGAGAGGTTATGTCCTAGTCGATTCTCATTCCGAATCATTGGAAGCTTTATCTGATTTTTTTGACGCATCTCTGCAAGATAATTCCACTAGCAGGGTTTCTATTTACTCTTCAAAGGGGACTAATATGGAAATTGGATTTAAAAAGCAAATAAACGATCCATCTTCTTGCTACGCCGATGGATTAGAAAATTCAAAAGGCAACGAGGCTGAGGAGTTAGTGTCATCATCTGCATTTGTTGCGTTAAGTAAAGTGCACTGGATTTCCTCACCGTTCCCTTCAAACCGGATTAAGTTGTTGCATCTGTATGTGCAGATCCTTGCCGAGCTTTCACACGAAAAGTATAATGCTGAAATGTATCTAGAATCATTTGCAATTAAGTTGGTAGTTTTGGCTATATGGAAGAATGCTCTAGAAACATGTAATTCTTGGGTGGCCTCTAATAACAAGGGTTTGTTGCATGGAAAAACTTCAACCAATGAATCCAAAATTCCATGTGGAAGTGAAAATGTGTGTGCATCACAGAACACAGAACAAAAAATAAATTTTAGTGATCCTTCATCTGTATTCATATGGGTCAAACAAGAGTTCATTGTTGCAATTGATTGTGCTGAGACATTATCATGTCATATTCAAAATATGGATGCCAAGATGCCAGATGCAATGGAGATCATATTCCAAAAAGCACTTTTATTTGGGACAAATGGTGCTGTAGCTGAGTATATGGAGAACAGAGATAAAGCAGCAGAATCTTATTCAAAAGCAATGCTTCTACTTTCATTCATTGTTGAAGAAGCAGAGAATCTTCCACTTAACCCATCATTTTCACTCACTTCTGATACTAAGAACCGAATCTTACAATATATTCTCAACCTTAAGTCTCATCAAAAAACTTTATCAGGGTCTTCTTCTAAGGATCTTTGA 2160 0.3935 MMMEFMGPTRLIGDYIVGPKIGSGSFAVVYRSTHRHTGLEYAIKEIHKKQLSPKVNESLFKEISILSTINHPNIIRLFQTIQTNDRIYLVLEYCGGGDLGAYIHRHGKVSEATARHFMTQLAAGLQVLQEKHLIHRDLKPQNLLLTSTSATPLLKIGDFGFARYDGIGGDPTYVSYVICNSCHLTTKLCTRSLTPQGLAETLCGSPLYMAPEIIQNYKYDAKADLWSVGAILFQLVTGRPPFQGNSQYELFQNILKSTELRFPPSALKELHSDCLDLCRSLLRQNPVERLTFKEFFNHNFLQETRSIMHVEQPSLHPPVISMVQQVVISATDKVSQSHYAHRLKSFLDDSNVDISPPDEIMLFQRSNDKRTACGKSALELSPTIVSDKLGKCIHDSLHFSKQPEVSDLMESIERGYVLVDSHSESLEALSDFFDASLQDNSTSRVSIYSSKGTNMEIGFKKQINDPSSCYADGLENSKGNEAEELVSSSAFVALSKVHWISSPFPSNRIKLLHLYVQILAELSHEKYNAEMYLESFAIKLVVLAIWKNALETCNSWVASNNKGLLHGKTSTNESKIPCGSENVCASQNTEQKINFSDPSSVFIWVKQEFIVAIDCAETLSCHIQNMDAKMPDAMEIIFQKALLFGTNGAVAEYMENRDKAAESYSKAMLLLSFIVEEAENLPLNPSFSLTSDTKNRILQYILNLKSHQKTLSGSSSKDL 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0067 719 SUPERFAMILY Protein kinase-like (PK-like) 11 347 IPR011009 -
Lal5g0067 719 Pfam Protein kinase domain 17 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0067 719 Gene3D Transferase(Phosphotransferase) domain 1 8 372 - -
Lal5g0067 719 ProSiteProfiles Protein kinase domain profile. 15 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0067 719 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 190 332 IPR045269 GO:0004674|GO:0006914
Lal5g0067 719 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 9 163 IPR045269 GO:0004674|GO:0006914
Lal5g0067 719 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 476 701 IPR045269 GO:0004674|GO:0006914
Lal5g0067 719 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lal5g0067 719 CDD STKc_ATG1_ULK_like 21 300 - -
Lal5g0067 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Lal5g0067 719 PANTHER BNAC06G18300D PROTEIN 190 332 - -
Lal5g0067 719 PANTHER BNAC06G18300D PROTEIN 9 163 - -
Lal5g0067 719 PANTHER BNAC06G18300D PROTEIN 476 701 - -
Lal5g0067 719 SMART serkin_6 15 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0067 Lal-Chr5 697741 704018 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0067 11 296 CBL-interacting serine-threonine protein kinases AT2G30360 33.564 3.45e-46 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Lal5g0067 Pkinase 6.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0067 - K08269 gmx:100782508 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0067 5 697741 704018 Lal5g0067 5 697741 704018 ECH