Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0058 ATGGGTCAATGTTACGGCAAAACGAACCCAAATTCCGAAAACGACCATGCTCCTAACATAACCACCTTAACTGAAACTACCACCACCGGCGACGGCGACGGTGACGGTTATCGTTCTCCTCTTCCTGTATCCGGCGTAGGTAACGGTTATAATTCAGTGAAGAACACGCCGGCGAGGTCGTCGTCTTCTCAGGCTAGTCCATGGCCGAGTCCATACCCTCACGGGGAAGGTGTGTCGCCATCGCCGGCGAGGGGGACGACGCCGAGGAGGTTTTTCCGGAGGCATTTTCCGCCGCCGTCTCCGGCTAAGCATATAAAGGCGTCGTTGGCGAAGCGGTTGGGGAAGCATATGCCGAAGGAGGGAACGATACCGGAGGAGGGGAGGAGCACGGAGGAGGCGACGGTGGCGGAGGAGGAGCAAGCACTAGATAAGAGGTTTGGGTATGGGAAGAATTTTGGTGCAAAATATGAATTGGGAAGGGAAGTAGGGAGAGGGCATTTTGGTCATACTTGCTATGGTAGAGGGAAGAAGGGTGAGCTTAACAACAAGCCTGTTGCTGTTAAAATCATTTCCAAGGCTAAGATGACCACAGCAATAGCAATCGAAGATGTTCGTAGAGAGGTGAAGCTATTAAAAGCTCTGTCTGGCCATAAACATCTCATCAAATTTCATGATGCTTTCGAGGATGCCAAGAATGTGTACATAGTTATGGAATTGTGTGAAGGTGGGGAGCTTCTTGACCGAATTCTGTCAAGGGGAGGAAGGTATACAGAGGAGGACGCGAAGGTTATAGTTTTTCAGATTCTCAGTGTTGTTGCCTTTTGTCATCTTCAAGGTGTTGTGCACCGTGACTTGAAGCCTGAGAATTTCCTCTTCACTTCAAGAAGTCAAGACGCTGATGTTAAGCTTATCGATTTTGGTCTATCCGACTTCATTAGACCAGATGAACGTCTGAATGACATTGTCGGGAGTGCATATTATGTTGCACCGGAGGTCCTACACAGGTCATATAGTGTAGAAGCAGATATATGGAGTATTGGTGTTATTACCTTCATCTTATTATGTGGAAGTCGACCTTTCTGGGCACGAACAGAATCTGGGATTTTTCGTTCCGTGCTCAGAGCTGATCCTAACTTCGATGATTTACCTTGGCCTTCCGTATCTCCAGAGGCCAAAGACTTTGTAAAAAGACTTCTAAACAAGGACTACAGGAAAAGAATGTCCGCTGCACAAGCTCTAGCTCATCCTTGGTTGAGGGACAACAGCCACCCTATCCCTTTGGATATATTAACTTATAAATTAGTGAAGTCTTATCTTCATGCAACACCATTCAAATGCGCAGCAGCGAAGGCCCTTTCAAAAGCATTGACAGAGAACGAGTTGGTGTATCTCGGAGCACAATTCAGATTATTGGAACCGAATAGAGATGGATATGCTCTTGCACGACATGCAACCGATGCTATGAGCGAGTCAAGGGTTCTTGACATCATAAACACGATGGAACCACTTGCATATAGAAAGATGGATTTTGAAGAATTTTGTGCAGCTGCAACTAGCACATATCAATTAGAGGCACTTGATAGATGGGAAGATATTGCCAACACTGCATTTGAGCACTTCGAGAGAGAGGGCAATCGAGTTATATCTATCGAAGAACTAGCCGGGGAATTGAATCTTGGTCCTTCAGCTTATTCAATTCTCAAAGATTGGATAAGAAATGATGGAAAGCTTAATTTATTTGGATATACAAAATTTTTGCATGGTGTTACTCTCAGAACTTCAAACCCAAGACACCGTTGA 1800 0.4572 MGQCYGKTNPNSENDHAPNITTLTETTTTGDGDGDGYRSPLPVSGVGNGYNSVKNTPARSSSSQASPWPSPYPHGEGVSPSPARGTTPRRFFRRHFPPPSPAKHIKASLAKRLGKHMPKEGTIPEEGRSTEEATVAEEEQALDKRFGYGKNFGAKYELGREVGRGHFGHTCYGRGKKGELNNKPVAVKIISKAKMTTAIAIEDVRREVKLLKALSGHKHLIKFHDAFEDAKNVYIVMELCEGGELLDRILSRGGRYTEEDAKVIVFQILSVVAFCHLQGVVHRDLKPENFLFTSRSQDADVKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSVEADIWSIGVITFILLCGSRPFWARTESGIFRSVLRADPNFDDLPWPSVSPEAKDFVKRLLNKDYRKRMSAAQALAHPWLRDNSHPIPLDILTYKLVKSYLHATPFKCAAAKALSKALTENELVYLGAQFRLLEPNRDGYALARHATDAMSESRVLDIINTMEPLAYRKMDFEEFCAAATSTYQLEALDRWEDIANTAFEHFEREGNRVISIEELAGELNLGPSAYSILKDWIRNDGKLNLFGYTKFLHGVTLRTSNPRHR 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0058 599 MobiDBLite consensus disorder prediction 45 69 - -
Lal5g0058 599 SUPERFAMILY Protein kinase-like (PK-like) 149 436 IPR011009 -
Lal5g0058 599 SMART serkin_6 156 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0058 599 SUPERFAMILY EF-hand 447 587 IPR011992 -
Lal5g0058 599 Gene3D Phosphorylase Kinase; domain 1 152 242 - -
Lal5g0058 599 CDD STKc_CAMK 155 417 - -
Lal5g0058 599 ProSitePatterns Protein kinases ATP-binding region signature. 162 188 IPR017441 GO:0005524
Lal5g0058 599 Gene3D - 441 587 - -
Lal5g0058 599 PANTHER CDPK-RELATED KINASE 3 64 592 - -
Lal5g0058 599 MobiDBLite consensus disorder prediction 1 103 - -
Lal5g0058 599 MobiDBLite consensus disorder prediction 1 33 - -
Lal5g0058 599 ProSiteProfiles Protein kinase domain profile. 156 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal5g0058 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Lal5g0058 599 PANTHER SERINE/THREONINE-PROTEIN KINASE 64 592 - -
Lal5g0058 599 Gene3D Transferase(Phosphotransferase) domain 1 243 440 - -
Lal5g0058 599 Pfam Protein kinase domain 156 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0058 Lal-Chr5 625217 631154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0058 1 593 EF-hand Containing Proteins AT3G50530 56.049 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal5g0058 Pkinase 1.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0058 - - gmx:100796256 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0058 5 625217 631154 Lal5g0058 5 625217 631154 ECH