Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0054 ATGGCTGGAGGAGTTGCTCCTCTAGTGGCTCTAAGTCATGAGTGGGGATGGTTCACTTATAGACATATTTACATCAAGAATGATTTGGAAGGTAATAAAGTTCTTAAACTTCATTGTAAAGACAAAAACAATGATCTTGGTGTTTATGAACTCAATTATAAAGATGAATTTAAGTTTCAATTTCAGTCTGCTTTTCGTCCGACTTTGTATTTTTGTGGCTTGACATGGGATGATAAATTACACTGGTTTGTAGTTTTTGATGAAAATAGAGATCATCATTTTTGCTTAGATCTTCATTGGAGTATAAGGAAAGATCAGCCATGTGTGTTCAATTGTGATCACAACTTGTATGAT 354 0.339 MAGGVAPLVALSHEWGWFTYRHIYIKNDLEGNKVLKLHCKDKNNDLGVYELNYKDEFKFQFQSAFRPTLYFCGLTWDDKLHWFVVFDENRDHHFCLDLHWSIRKDQPCVFNCDHNLYD 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0054 118 Pfam Plant self-incompatibility protein S1 22 114 IPR010264 -
Lal5g0054 118 PANTHER - 18 109 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0054 Lal-Chr5 575963 576729 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0054 23 118 Carbohydrate Esterase AT3G16970 42.574 1.89e-23 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0054 - - jre:118348457 85.1149