Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0011 ATGAGGATTATGATAAAGGGCGGTGTTTGGAAAAACACTGAAGATGAAATATTGAAAGCAGCTGTTATGAAATATGGCAAAAATCAATGGGCTCGAATCTCTTCCCTTCTCGTTCGTAAATCTGCTAAACAATGTAAAGCTCGCTGGTACGAGTGGCTCGATCCTTCCATCAAAAAGACTGAGTGGACAAGAGAAGAGGATGAAAAACTGCTTCATCTTGCTAAGCTTATGCCCACACAGTGGAGAACTATTGCTCCGATCGTTGGCCGTACACCATCCCAGTGCCTTGAGCGTTACGAGAAACTCCTTGATGCAGCCTGTGTTAAAGATGAGAACTATGAACCTGGTGACGACCCACGGAAATTGCGTCCAGGGGAGATTGATCCAAACCCTGAGTCGAAGCCTGCAAGACCAGACCCCGTTGACATGGACGAGGATGAGAAGGAAATGCTTTCGGAAGCACGAGCTCGGTTAGCCAACACGAAAGGAAAGAAGGCAAAAAGGAAAGCCAGGGAGAAGCAGCTCGAGGAAGCCAGGAGGCTTGCTTCTTTGCAGAAAAAGAGAGAACTGAAGGCTGCTGGAATTGATATCAGGCAGCGGAGGAGGAAAAGGAAAGGAATAGACTATAATGCGGAAATACCATTTGAGAAGAGACCTCCTCCTGGGTTTTTTGATGTTGCTGATGAGAATAGACCGGTTGAACAACCTAATTTCCCTACTACAATCCAGGAACTTGAGGGAAAAAGAAGGGTAGATGTTGAAGCGCAATTAAGAAAGCAAGACATTGCAAAAAATAAAATAGCACAAAGGCAAGATGCCCCATCTGCTATTTTGCATGCCAACAAGATGAATGACCCAGAAACGGTTAGAAAGAAATCAAAACTGATGCTTCCGCCACCCCAGATATCCGACCATGAATTGGATGAAATTGCAAAGTTGGGTTATGCAAGTGACCAAGCAGGGATTGAGGAACTTGGAGAAGGCAGTAGTGCTACACGTGCTCTTCTGGCTAATTATGCACAGACACCCGGCCAAGGAATGACTCCCTTAAGAACCCCTCAGAGAACACCGGCTGGTAAAGGGGATGCTATCATGATGGAAGCCGAAAATCTGGCTAGGTTGAGAGAGTCTCAGACACCGTTGTTAGGAGGAGAGAACCCAGAGTTGCATCCTTCAGATTTTTCTGGGGTCACTCCTAAGAGAAAGGAAATTCAAACTCCAAATCCGGTGCTGACTCCCTCTGCAACTCCTGGAGGGACACCAAGCCTTACTCCTAGAAGTGGTATGACACCAGCAAGGGATGGTTTTTCTTTTGGTATGACTCCGAAGGGAACTCCTCTCAGGGATGAGCTACATATCAATGAGGACATGGATATCCATGACAGTGCTAAGCTTGAGCTACGGAGACAAGCTGATCTGAGAAGAAGTTTGCGCTCTAGTTTAAGCAGCATTCCACAGCCCAAAAATGAGTACCAGGTGGTGATGCAACCGGTTCCAGAAGATGCTGAAGAACCTGAGGAGAAGATTGAAGAGGATATGTCTGATAGAGTAGCTAGAGAAAAGGCAGAAGAAGAGGCACAACTGCAGGCACTACTTCGAAAACGATCAAAAGTCCTTCAAAGGGGACTTCCTAGGCCTCCTGCTGCATCTTTGGAGCTTATTAAAAATTCGTTGATGAGAGCAGTTGAGGACAAGAGTTCCTTTGTCCCACCAACCTCAGTTGAGCAAGCTGATGAGCTGATAAGAAAGGAGCTTCTAACCTTACTGGAGCATGACAATGCTAAGTATCCGCTTGATGAGAATAAGGAGAAAAAGAAAGGAGCCAAGCGTTCAGCATCCGGGTCTGCTGTCCCTGTTATAGAAGATTTTGAGGAAGAGGAGATGAAAGATGCTGATCAGTTGATAAAGGAGGAGGCCCAGTATCTTCGCGTGTCAATGGGGCATGAGAGTGAATCCCTTGATGAATTTCTTGAAGCACATATAACTTGCATTAATGATCTTATGTACTTTGCCACCCGTAATTCCTATGGTCTATCCAGTGTTGCTGGAAGCATGGAGAAGCTAGCGGCTTTGCAGAATGAATTTGAGAAAGCGAGAAGCAAGTTGGATGATGGTAAGGAGAGGATAGTACGCATTGAGAAGAAGGCAATGGTGCTCACGCAAGGCTATGAGACGAGGGCAATGAAAAGTCTTTGGCCACAAATTGAGGCCACTTTCAAGCAGATGGATGTAGCGGCAACAGAATTGGAGTGCTTCCAAGCTTTACAAAAGCAAGAGCAATTAGCAGCATCACACAGGATAAACAATGTATGGGGTGAAGTACAAAAGCAAAAAGAACTTGAGAAAACTCTACAAAAGAGATATGGAGATATTACAGCAGAGCTTGAAAGGGTACAAAATGTGATGAACCACTACAGGATACAAGCACAAGAAGAAATAGAAGCAAATAATCACGAAATTGAATCTACTAAGATTACAGGTGATGAAACTAATGTTCAGGGTACTGAGAATGGAAGTGCTGTATCAGCTGACACTACTGACCAACAAGTAGACACTGTGCAAGATCAAGCTGCTTGTAGCTTAAAAAATGATGATATTGATGTGAATTCTTGTAAAGAGCAAACAGCGCCCGACACTGATCTTAAATTGACAGATACACCTATTGTGGAGGATGACATTACAAATGTGGTAGAAAGTAACAAAACTGGTGCTTGTATTGACAGAGAAACCACAGTAGATTTGAGTGCTGCAGTTGAAGTAAGTAGTAGTATTGAGGGAAACAAGGAGGATAGAGATGTTGAGAATCTAGACGATGCTGTGGAAGCTTTGAACCAAGGTGCATAA 2844 0.4441 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRRKRKGIDYNAEIPFEKRPPPGFFDVADENRPVEQPNFPTTIQELEGKRRVDVEAQLRKQDIAKNKIAQRQDAPSAILHANKMNDPETVRKKSKLMLPPPQISDHELDEIAKLGYASDQAGIEELGEGSSATRALLANYAQTPGQGMTPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKRKEIQTPNPVLTPSATPGGTPSLTPRSGMTPARDGFSFGMTPKGTPLRDELHINEDMDIHDSAKLELRRQADLRRSLRSSLSSIPQPKNEYQVVMQPVPEDAEEPEEKIEEDMSDRVAREKAEEEAQLQALLRKRSKVLQRGLPRPPAASLELIKNSLMRAVEDKSSFVPPTSVEQADELIRKELLTLLEHDNAKYPLDENKEKKKGAKRSASGSAVPVIEDFEEEEMKDADQLIKEEAQYLRVSMGHESESLDEFLEAHITCINDLMYFATRNSYGLSSVAGSMEKLAALQNEFEKARSKLDDGKERIVRIEKKAMVLTQGYETRAMKSLWPQIEATFKQMDVAATELECFQALQKQEQLAASHRINNVWGEVQKQKELEKTLQKRYGDITAELERVQNVMNHYRIQAQEEIEANNHEIESTKITGDETNVQGTENGSAVSADTTDQQVDTVQDQAACSLKNDDIDVNSCKEQTAPDTDLKLTDTPIVEDDITNVVESNKTGACIDRETTVDLSAAVEVSSSIEGNKEDRDVENLDDAVEALNQGA 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0011 947 CDD SANT_CDC5_II 55 106 - -
Lal5g0011 947 MobiDBLite consensus disorder prediction 826 848 - -
Lal5g0011 947 MobiDBLite consensus disorder prediction 157 176 - -
Lal5g0011 947 MobiDBLite consensus disorder prediction 497 522 - -
Lal5g0011 947 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Lal5g0011 947 Gene3D - 5 59 - -
Lal5g0011 947 Gene3D - 60 114 - -
Lal5g0011 947 Pfam pre-mRNA splicing factor component 406 654 IPR021786 -
Lal5g0011 947 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Lal5g0011 947 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Lal5g0011 947 MobiDBLite consensus disorder prediction 380 447 - -
Lal5g0011 947 Coils Coil 167 187 - -
Lal5g0011 947 PANTHER - 1 836 - -
Lal5g0011 947 SMART sant 6 55 IPR001005 -
Lal5g0011 947 SMART sant 58 105 IPR001005 -
Lal5g0011 947 MobiDBLite consensus disorder prediction 113 150 - -
Lal5g0011 947 Pfam Myb-like DNA-binding domain 10 70 - -
Lal5g0011 947 Coils Coil 681 715 - -
Lal5g0011 947 MobiDBLite consensus disorder prediction 822 848 - -
Lal5g0011 947 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Lal5g0011 947 Coils Coil 514 541 - -
Lal5g0011 947 CDD SANT 10 53 IPR001005 -
Lal5g0011 947 MobiDBLite consensus disorder prediction 399 427 - -
Lal5g0011 947 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Lal5g0011 947 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0011 Lal-Chr5 216609 221518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0011 1 840 MYB-Related Transcription Factor Family AT1G09770 73.318 0.0 1211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal5g0011 Myb_Cef 3.3e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0011 K12860 - gmx:100790369 1398.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0011 5 216609 221518 Lal5g0011 5 216609 221518 ECH