Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1659 ATGGCGTTCTGTAACAAGCTCGGAAATCTCTTGAGGCAGGGTGCTGCTCAAAGCAGACAAGAAAGCATGCTTAATTATATTCGCATGATGTCTGGTAGCAAGCTTTTTGTTGGAGGGCTTTCATATGGTGTTGATGACCAGGCTCTTAGGGATGCATTTGCCAGCTTTGGAGAAGTTGTTGAGGCAAGGGTCATCTCTGATAGAGACACTGGACGATCGAGGGGATTTGGATTTGTCAACTTCAACAGTGACGAGTCTGCTTCTACAGCACAAACTGCCATGGATGGGCAGGATCTAAATGGCCGAAACATCCGGGTATCCTTTGCAAATGAGAGACCATCTGGACCTCGATCTCCTGGCTATGGCGGCGGCGGTGGTTATAGCAGGGGTGGGAGTGGTGGAGGTTTTGGTGAGCAAGGCTATTAA 426 0.4906 MAFCNKLGNLLRQGAAQSRQESMLNYIRMMSGSKLFVGGLSYGVDDQALRDAFASFGEVVEARVISDRDTGRSRGFGFVNFNSDESASTAQTAMDGQDLNGRNIRVSFANERPSGPRSPGYGGGGGYSRGGSGGGFGEQGY 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1659 141 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 1 140 - -
Lal4g1659 141 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 105 IPR000504 GO:0003723
Lal4g1659 141 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3 MITOCHONDRIAL 1 140 - -
Lal4g1659 141 Gene3D - 12 141 IPR012677 -
Lal4g1659 141 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 33 111 IPR000504 GO:0003723
Lal4g1659 141 MobiDBLite consensus disorder prediction 87 141 - -
Lal4g1659 141 SUPERFAMILY RNA-binding domain, RBD 29 137 IPR035979 GO:0003676
Lal4g1659 141 SMART rrm1_1 34 107 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1659 Lal-Chr4 20635899 20637973 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1659 33 125 Eukaryotic Initiation Factors Gene Family AT4G34110 29.825 5.37e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1659 - - lang:109344110 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1659 4 20635899 20637973 Lal21g1370 21 17082645 17084443 LSH