Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1651 ATGGAGTGGAATTCAAAATCACTGGGGCAATGGGACTGGGAGGAGCACTTGCTCTTCTTCAATGGAAAAGCTTCAGAAAATCCACCAAAGTTACAATCAACAGATTTGAGTGCTGAAGCAGATCAAGAAATCAATGTTGGGCCGTTCCATCCATCAGGGGCTAATGGATGTTCCGAGTCTGAACTAATACATGCTTCTTCATCAAGGAGCTCAAAATCAGCTTCCATCAATTCTTCATCGAGTGAGGATAGCAAAATATCTATGTTCACATTGGAAGGTTCTCAAGATGATGACTCGAGTGGTAAGAAAGAATTGTCCAAAGAAGAGCCAGTTGAAACTTCTCCAGCACCAGAACCCTCTTCTGCTTCTGGTGAACCATTGCTCACTCTAAAGCTTGGTAAAAGGTTGTACTTTGAGGATGTTTGTGCAGGAAGTGATTCCAAGAGACCCTCTCCAAGTACTGGAAAGAAATGTAAATCCAATGGTCAGAACTTGCAACATCCAAGCTGCCAGGTTGAGGGCTGTGGCCTTGATCTCTCATCTGCAAAGGACTACCATCGCAAACATAGAGTTTGTGAAAATCATTCCAAATTCCCTAAGGTTATTATAGCTGGCTCAGAACGTCGATTTTGCCAGCAATGTAGCAGGTTCCACGATCTGTCAGAATTTGATGATAAAAAGAGAAGCTGCAGGCGACGCCTTTCAGATCACAATGCAAGGCGCCGCAAACCTCATCCTGAAACAGTTCAATTAAAGACATCGGCTTTGTCTTCATCACCCTATGATAGGAGACAATTAATGATCCCATTTGCATATTCAAGGACTGCTACAAATTTAGCCTGGCAAGACATACAGAGTAGCAATCTGCCTCAGACAAAAGATTTTCTCATGAAGCCTGCAGAAGGCTTCAATAAGATACAAAGTGCTGTCACTATGCTTTCTGATGATTCCAGTGGCTTTCTTACATCCAAAGGCATAGCAACCAAGAGTATTATTACAGATCCCATTGGCTCTTCTGATATGAATGCTACACAAGATGTTAACCGTGCTCTCTCTCTTCTGTCAACCAATTCATCATGGAATGCTGCATATGAGACCAAGTCCTTCTCCAGTAACACTCATCAACCCATAACAACTCATGCAATGTCTCATCATCCCTTACCTTTTCCTTCATCAGAGTACTGGAACACTGATCACCAACCACCCAATTCCACCATGTGTATCTCTTCATACTCCGATTTTGATAACACCAATCGATTTCAAGACTTTCAGCTGTGGAACACACCCTATGAATCTGCTTCTCCTTTCAACCAGCTGGATTAA 1323 0.4263 MEWNSKSLGQWDWEEHLLFFNGKASENPPKLQSTDLSAEADQEINVGPFHPSGANGCSESELIHASSSRSSKSASINSSSSEDSKISMFTLEGSQDDDSSGKKELSKEEPVETSPAPEPSSASGEPLLTLKLGKRLYFEDVCAGSDSKRPSPSTGKKCKSNGQNLQHPSCQVEGCGLDLSSAKDYHRKHRVCENHSKFPKVIIAGSERRFCQQCSRFHDLSEFDDKKRSCRRRLSDHNARRRKPHPETVQLKTSALSSSPYDRRQLMIPFAYSRTATNLAWQDIQSSNLPQTKDFLMKPAEGFNKIQSAVTMLSDDSSGFLTSKGIATKSIITDPIGSSDMNATQDVNRALSLLSTNSSWNAAYETKSFSSNTHQPITTHAMSHHPLPFPSSEYWNTDHQPPNSTMCISSYSDFDNTNRFQDFQLWNTPYESASPFNQLD 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1651 440 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 2 22 438 - -
Lal4g1651 440 Gene3D - 160 231 IPR036893 GO:0003677|GO:0005634
Lal4g1651 440 Pfam SBP domain 170 243 IPR004333 GO:0003677
Lal4g1651 440 MobiDBLite consensus disorder prediction 23 125 - -
Lal4g1651 440 MobiDBLite consensus disorder prediction 147 166 - -
Lal4g1651 440 MobiDBLite consensus disorder prediction 144 166 - -
Lal4g1651 440 MobiDBLite consensus disorder prediction 96 111 - -
Lal4g1651 440 MobiDBLite consensus disorder prediction 59 95 - -
Lal4g1651 440 ProSiteProfiles Zinc finger SBP-type profile. 167 244 IPR004333 GO:0003677
Lal4g1651 440 MobiDBLite consensus disorder prediction 26 40 - -
Lal4g1651 440 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 22 438 IPR044817 GO:0003677
Lal4g1651 440 SUPERFAMILY SBT domain 168 249 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1651 Lal-Chr4 20576337 20581888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1651 1 386 SBP-box Gene Family AT5G43270 38.500 7.59e-61 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lal4g1651 SBP 1.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1651 - - lang:109328770 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1651 4 20576337 20581888 Lal17g1670 17 17895162 17903360 LSH