Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1628 ATGGGTCTCTCAAACTTCCCTAGTGCAGCTGATGGGGTACTTCCTATTCTTGTGATAAACACATTGCACTCAGTGATTTTGTTAAAGGACATGTTCAGATTCATGCTTCAAGTAGTTGGTGGCACAACAACAACTTCAACTTCAACTTCCTCTAATATGGAGCAAGAAGAATACTACTACTACTCAGATAATGAGATTTCTTCTTCAAGGGAAAAGAGGGTCTCAATAACTCACTACAAGTCCTTGTGTGATAATAACAACAGTATAGCTATTATGGCAGAGTGTTGCTGCTGTGTGTGTCTTTGTAGATTTGAACCTAATGAAGAGGTGAGTGAGTTACCTTGCAAGCATTTCTTCCATAGATGTTGCTTAGACAAATGGTTTCATAACAAACACACCACTTGCCCTTTGTGTCGCTCCATACACTAA 429 0.3939 MGLSNFPSAADGVLPILVINTLHSVILLKDMFRFMLQVVGGTTTTSTSTSSNMEQEEYYYYSDNEISSSREKRVSITHYKSLCDNNNSIAIMAECCCCVCLCRFEPNEEVSELPCKHFFHRCCLDKWFHNKHTTCPLCRSIH 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1628 142 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 44 142 IPR013083 -
Lal4g1628 142 SMART ring_2 97 138 IPR001841 -
Lal4g1628 142 SUPERFAMILY RING/U-box 96 141 - -
Lal4g1628 142 Pfam Ring finger domain 97 139 IPR001841 -
Lal4g1628 142 PANTHER - 1 142 IPR044249 -
Lal4g1628 142 PANTHER F21J9.24-RELATED 1 142 - -
Lal4g1628 142 ProSiteProfiles Zinc finger RING-type profile. 97 139 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1628 Lal-Chr4 20426016 20426444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1628 1 140 C3H Transcription Factor Family AT2G04240 29.333 4.73e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1628 K16285 - gmx:100811790 168.318