Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1621 ATGGCTATTGCACCTTTTGCTACTACTCAATGGGGAATTCGTCCTCACCATGTTTTCACCAAATCCACTATCATGGGTAGGGTTGCATCTTCCACTTCTACCCACAATTTTACAAGCAGGGTAAGCTTTATGGCTGCCCCAAGTTCAACCTTTTTTTCTCGGGATTCCTTGCGTGGACTATATGACATGGGTTCATCTCAAACTTTGCATCGTCGTAGGGGGTCAACGTTGATAGTTAGAGCAGAAGCAGATTACTATTCTGTCCTTGGAGTGTCAAAAAATGCTAGCAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGGAATTATCATCCAGATGTGAACAAAGAACCTGGTGCAGAACAGAAGTTTAAGGACATTAGCAATGCATATGAGGTCTTATCAGATGATGAAAAGCGATCCATATATGACACATATGGAGAAGCTGGACTTAAAGGTTCAGCAGGAATGGGAGGCATGGGGGATTTCAACAATCCTTTTGATCTGTTTGAGACATTGTTCGAGGGCATGAATGGTGGGATGAACTCCAGAGGTTCTCCTAATGGAGCAGTTGAAGGTGAAGATGAGTATTACAGTCTTGTTTTGAACTTTAAAGAAGCAGTTTTTGGAGTAGAAAAGGAGATAGAGATTAGGCGATTGGAGAGCTGTGGAACTTGCAATGGTTCAGGGGCTAAACCAGGGACGAAGTCATCCAGATGTAGCACTTGCGGTGGTCAAGGTCGGGTTGTCTCACAAACAAGGACTCCACTGGGTATCTTTCAGCAGACTATGACCTGCTCTTCCTGCAATGGGAGAGGAGAAACTTCAACACCTTGCAATACATGCTCTGGTGATGGTCGAGTGAGAAGAACAAAGCGGATAAGTCTGAAGGTTCCAGCTGGAGTGGATTCTGGTAGCCGATTAAGGGTCCGAAATGAAGGTAATGCTGGGAAGCGTGGGGGTCCTTCTGGCGACCTCTTTGTTGTCCTTGAAGTTATCCCAGATCCTGTCCTTAAAAGAGATGATACTAACATTTTATACACCTGTAAGGTGTCTTACATTGATGCAATCTTGGGGACTATAATTAAGGTTCCTACTGTAGATGGCACAGTGGATTTAAAAATCCCGTCCGGCACTCAACCGGGTGCGACACTTGTAATGGCGAGGAAAGGTATTCCGGTTCTCAACAAAAGCAACATGAGGGGTGATCAACTGGTCCGCGTGCAAGTTGAAATCCCTAAAAGATTGAGCAGTGATGAGAAAAATCTTATTGAGAAACTTGCTGATTTAAGCAAAGGCAAAACTGCCACCAGTAAGAAATAA 1326 0.4419 MAIAPFATTQWGIRPHHVFTKSTIMGRVASSTSTHNFTSRVSFMAAPSSTFFSRDSLRGLYDMGSSQTLHRRRGSTLIVRAEADYYSVLGVSKNASKSEIKSAYRKLARNYHPDVNKEPGAEQKFKDISNAYEVLSDDEKRSIYDTYGEAGLKGSAGMGGMGDFNNPFDLFETLFEGMNGGMNSRGSPNGAVEGEDEYYSLVLNFKEAVFGVEKEIEIRRLESCGTCNGSGAKPGTKSSRCSTCGGQGRVVSQTRTPLGIFQQTMTCSSCNGRGETSTPCNTCSGDGRVRRTKRISLKVPAGVDSGSRLRVRNEGNAGKRGGPSGDLFVVLEVIPDPVLKRDDTNILYTCKVSYIDAILGTIIKVPTVDGTVDLKIPSGTQPGATLVMARKGIPVLNKSNMRGDQLVRVQVEIPKRLSSDEKNLIEKLADLSKGKTATSKK 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1621 441 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Lal4g1621 441 CDD DnaJ_zf 224 287 IPR001305 GO:0031072|GO:0051082
Lal4g1621 441 CDD DnaJ 84 137 IPR001623 -
Lal4g1621 441 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 211 290 IPR036410 -
Lal4g1621 441 TIGRFAM DnaJ_bact: chaperone protein DnaJ 84 430 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lal4g1621 441 Gene3D DnaJ domain 81 187 IPR036869 -
Lal4g1621 441 Gene3D - 194 329 - -
Lal4g1621 441 Hamap Chaperone protein DnaJ [dnaJ]. 81 437 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lal4g1621 441 Gene3D - 334 441 - -
Lal4g1621 441 ProSiteProfiles Zinc finger CR-type profile. 211 292 IPR001305 GO:0031072|GO:0051082
Lal4g1621 441 Pfam DnaJ domain 84 145 IPR001623 -
Lal4g1621 441 Gene3D - 224 287 - -
Lal4g1621 441 SUPERFAMILY HSP40/DnaJ peptide-binding domain 339 425 IPR008971 GO:0006457|GO:0051082
Lal4g1621 441 PANTHER BNAA01G34580D PROTEIN 32 440 - -
Lal4g1621 441 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 32 440 - -
Lal4g1621 441 Pfam DnaJ C terminal domain 199 414 IPR002939 -
Lal4g1621 441 ProSiteProfiles dnaJ domain profile. 84 148 IPR001623 -
Lal4g1621 441 CDD DnaJ_C 195 417 - -
Lal4g1621 441 PRINTS DnaJ domain signature 86 104 IPR001623 -
Lal4g1621 441 PRINTS DnaJ domain signature 104 119 IPR001623 -
Lal4g1621 441 PRINTS DnaJ domain signature 120 140 IPR001623 -
Lal4g1621 441 PRINTS DnaJ domain signature 140 159 IPR001623 -
Lal4g1621 441 SMART dnaj_3 83 140 IPR001623 -
Lal4g1621 441 SUPERFAMILY HSP40/DnaJ peptide-binding domain 192 346 IPR008971 GO:0006457|GO:0051082
Lal4g1621 441 SUPERFAMILY Chaperone J-domain 80 181 IPR036869 -
Lal4g1621 441 Pfam DnaJ central domain 224 287 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1621 Lal-Chr4 20376937 20381355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1621 85 147 C2H2 Transcription Factor Family AT1G74250 43.478 1.14e-09 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1621 4 20376937 20381355 Lal17g1635 17 17679843 17683474 LSH