Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1620 ATGTCACTGGAAATGGACTTCATATTTGCTCTTTTGCTGTTGACTAACATGTGTTCTTTTGCGCTGCCCGATTCCGATTCAGAAGTTGAGGCACTCTATGCATTGAAACTATCATTAAATGCTTCAGCTGACCAGCTAAGTAATTGGAACAACAATCAAGTGAATCCTTGTACTTGGTCCAATGTTGACTGTCATAATAACAGTGTTACTCAAGTTTCACTAGCATTTATGGGATTCACAGGAACCTTGACACCAAGAATAGGAGTTCTAAAAAATCTTATAACCCTTTCTTTGCAAGGGAATAGAATCACAGGAGGCATACCAAAAGAATTAGGAAACCTTACAAGCTTGAACAGATTGGATTTGGAAAACAACAGTTTAACTGGTGAAATACCATCTACCATTAGTAATCTTAAAAAGCTTCAATTCTTAACATTGAGTCAAAACCATCTCAGTGGGACTATTCCTGAATCACTTGCCAGTCTCCCAAACTTGAACAATGTTCTGATGGATTCAAATGATCTTAGTGGTCAGGTTCCAGAGCAGTTATTCAATGTTCCTAAATACAATTTCACTGGAAATAAGTTAAACTGTGGCATTACTTATCATCATGTTTGCGAGTCTGATAATAACGATCCAGGTTCGCCGCATAAAACGAAAATTGGCGTCGTAGTTGGAATAGTTGTAGGTATAGTTGTTTTTCTTTTTCTTGGTGGTCTGGTTTTCTTCTGGTACAAAGGCTACAACGAAGAAGATTTTGTAGATGTTTCAGGGGAAGTTGATTCGCGAATTTCATTAGGTCAACTACAAAGATTTGCATGGAGAGAACTACAGATAGCCACAAACAACTTCAGTGAGAATAATATCTTAGGAAAGGGAGGTTTTGGAAAGGTTTATAAAGGTGTTCTAGTTGATGGCACAAAAGTTGCTGTCAAAAGGATGACAGATTATGAAAGTCCCGGGGGTAATGCAGCTTTCCAGCGTGAAGTTGAGATGATAAGCGTAGCTGTTCATCGGAACCTGTTACGGCTGATTGGGTTTTGTACTACTCCAACCGAACGCCTCTTAGTCTATCCCTTCATGCAGAACTTAAGTGTTGCCTATCGTCTACGAGAACGCAAACCTGGGGAACCCATTTTGGATTGGCCTACAAGAAAACGAGTGGCTCTGGGAACAGCCCGTGGCCTTGAATATCTTCACGAGCAATGCAATCCTAAGATTATTCACAGGGATGTGAAAGCAGCTAATATACTACTAGATGAAGATTTTGAGGCAGTTGTTGGTGATTTTGGTTTGGTAAAGTTAGTTGATGTTCGAAAGACTAATGTGACAACTCAAGTTCGTGGGACAATGGGCCATATAGCTCCCGAATACTTGTCCACCGGAAAATCTTCAGAAAGGACAGATGTTTTCAGTTACGGGATCATGCTTTTGGAGCTTGTTACAGGTCAACGTGCCATTGACTTTTCACGCTTGGAGGACGAAGATGATGTGTTATTGCTTGATCATGTTAAGAAACTTAAAAGGGAGAAAAAGCTAGATGCTATTGTTGACCGCAACCTTGATAAAAATTACGATATGGAAGAGGTTGAAATCGTTGTACAAGTAGCGTTGCTTTGCACGCAAGATTCACCGGAGGATCGTCCAGCAATGTCAGATGTTGTAAGAATGCTAGATGGAGAAAGGTGGGAAGAATGGAGGCATGCCGAGATCGCACAAAGGCAAGATCATGAGAAACTAGAAAGAAGAACAAGCTTTGGAGAAGATTCAGTTCATAAACAAAAAGCCATCGAGTTGTCTGGTGGAAGATGA 1812 0.404 MSLEMDFIFALLLLTNMCSFALPDSDSEVEALYALKLSLNASADQLSNWNNNQVNPCTWSNVDCHNNSVTQVSLAFMGFTGTLTPRIGVLKNLITLSLQGNRITGGIPKELGNLTSLNRLDLENNSLTGEIPSTISNLKKLQFLTLSQNHLSGTIPESLASLPNLNNVLMDSNDLSGQVPEQLFNVPKYNFTGNKLNCGITYHHVCESDNNDPGSPHKTKIGVVVGIVVGIVVFLFLGGLVFFWYKGYNEEDFVDVSGEVDSRISLGQLQRFAWRELQIATNNFSENNILGKGGFGKVYKGVLVDGTKVAVKRMTDYESPGGNAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLRERKPGEPILDWPTRKRVALGTARGLEYLHEQCNPKIIHRDVKAANILLDEDFEAVVGDFGLVKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFSYGIMLLELVTGQRAIDFSRLEDEDDVLLLDHVKKLKREKKLDAIVDRNLDKNYDMEEVEIVVQVALLCTQDSPEDRPAMSDVVRMLDGERWEEWRHAEIAQRQDHEKLERRTSFGEDSVHKQKAIELSGGR 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1620 603 MobiDBLite consensus disorder prediction 577 596 - -
Lal4g1620 603 Gene3D Transferase(Phosphotransferase) domain 1 361 574 - -
Lal4g1620 603 Gene3D Phosphorylase Kinase; domain 1 253 360 - -
Lal4g1620 603 SUPERFAMILY Protein kinase-like (PK-like) 262 558 IPR011009 -
Lal4g1620 603 PANTHER LRR RECEPTOR-LIKE KINASE 8 603 - -
Lal4g1620 603 MobiDBLite consensus disorder prediction 577 603 - -
Lal4g1620 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Lal4g1620 603 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Lal4g1620 603 Pfam Protein kinase domain 285 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g1620 603 SMART serkin_6 284 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g1620 603 ProSitePatterns Protein kinases ATP-binding region signature. 290 312 IPR017441 GO:0005524
Lal4g1620 603 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 603 - -
Lal4g1620 603 Gene3D Ribonuclease Inhibitor 24 207 IPR032675 -
Lal4g1620 603 ProSiteProfiles Protein kinase domain profile. 284 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g1620 603 SUPERFAMILY L domain-like 26 197 - -
Lal4g1620 603 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1620 Lal-Chr4 20366863 20372586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1620 4 603 Receptor kinase-like Gene Family AT5G10290 70.279 0.0 833
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lal4g1620 Pkinase 3.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1620 - - gmx:100793416 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1620 4 20366863 20372586 Lal7g0586 7 12807461 12814765 PCT