Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1611 ATGACATTCAAGCGCAGGAATGGTGGACGCAACAAGCATGGTCGTGGCCATGTTAAGTTCGTTCGCTGCTCCAACTGTGGCAAATGCTGTCCCAAGGATAAATCAATTAAGCGATTTGTGGTGAGAAACATTGTTGAGCAGGCTGCAGTTAGAGATGTTCAGGAGGCCTGTGTCTATGAGCAATACACTCTTCCCAAGCTGTATGTGAAGTTGCAGTACTGTGTTTCCTGTGCTATCCACTCTCATGTTGTGAGGGTTCGATCCCGCACTGACAGGAGGAAGCGTGATCCCCCACAGCGCTTCATCAGGCGTCGGGATGATGCACCAAGGCCTGGTCAGCCTGGTCAGGCACCTCGTCCTGCTGGTGCTGTCGGCGCTCCTCCTCGTGCCTAA 393 0.5293 MTFKRRNGGRNKHGRGHVKFVRCSNCGKCCPKDKSIKRFVVRNIVEQAAVRDVQEACVYEQYTLPKLYVKLQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDDAPRPGQPGQAPRPAGAVGAPPRA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1611 130 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lal4g1611 130 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lal4g1611 130 MobiDBLite consensus disorder prediction 86 130 - -
Lal4g1611 130 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Lal4g1611 130 MobiDBLite consensus disorder prediction 90 110 - -
Lal4g1611 130 PANTHER 40S RIBOSOMAL PROTEIN S26 1 129 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lal4g1611 130 PANTHER 40S RIBOSOMAL PROTEIN S26 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1611 Lal-Chr4 20298330 20300357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1611 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 82.759 6.09e-69 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1611 K02976 - gmx:100781822 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1611 4 20298330 20300357 Lal4g1611 4 20298330 20300357 ECH