Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1598 ATGATGCCTCTACTCTCCAAAGTTTCCATCTCTCTTCCATTCTTTCCTTTCTCTTCAAACGAAACCTTGGAACTAGTATATAATTATAAACTAGGGTACTTAATTTGTGTTTCAGGGTTTGTGCCTGAAATGGAAAAAATAGGGAATGTTTTAATGCAGAAGTATGAATTTGGAAAACTTTTAGGCCAAGGAAACTTTGCAAAGGTTTATCATGCAAGGGACCTTAGAACGGGTGATAATGTCGCAGTTAAGGTGATTGATAAAGAGAAAGTTCTGAAAGTTGGTCTAGTGGATCAAACAAAGAGAGAGATATCTATTATGAGATTGGTTAAACACCCAAATGTGTTGCAACTTTATGAGGTTTTGGCCACAAAAACCAAGATTTACTTCATCATAGAATACGCTAAAGGGGGTGAGCTTTTCAACAAGGTAGCCAAAGGTAGATTCCATGAGGACATGGCAAGGAAGTACTTTCAACAATTGATCAGTGCTGTTGATTATTGCCACAGCAAGGGTGTTTATCACAGGGATTTGAAGCCGGAGAATTTGCTTTTGGATGAGAATGGAGTACTCAAGGTAGCAGATTTCGGATTGAGTGCACTTGTTGAATCTCATCACCAAGGAAGCATGATGAGTACAGTTTGTGGAACTCCTGCATATGTTGCTCCTGAGGTTATTAGTAGAAAGGGTTACGATGGCGCGAAAGCGGATTTATGGTCATGTGGTGTGATCTTATATGTTCTTTTGTCTGGCCACTTACCATTTTATGATCTGAATCTTATAGCACTTTATAAGAAAATTGGCAAGGCTGAATATAAATGTCCGAACTGGTTTTCATTTGAATCGCGCAGATTAATAGCAAAAATCCTTAATCCAAATCCACATACTAGGATATCCACAGCTAAAGTTATGGAAAGTTCCTGGTTCAGAAAAGGATTCAACTCTAAATCTGATAAAATGGAAAAAAAGCTTACAAATGTGGCCTCGTCTTCAGGTTCAGTTGATTCAGATAATGTTTTCGGTGTGTTTGATAACCAAAGTGGTATTGTTGAGGAAAATCGAGCATTGGTTAAACCTACTTATTTAAACGCTTTCGATATAATTTCTCTGTCTGCTGGGCTAGACTTAACTTGCCTTTTCGCAAACAATGGTGACCAAGATAATGTCAAGTTTACATCCATGAACTCTGCCTCATCAATCATGTCTACATTGGAGGATATCGCTCGCGTTTTGAAGATGAAGATAACAAAAAAAGACGGGGGGTTGTTGAAATTGGAGAGGTCTAGGGAAGGTAGAAAAGGACAACTTTCGATTGATGTTGAAATGTTCGAGTTCACTGAATCTTTCTATTTGGTTGAGATGAAGAAGTCATGTGGTGATACATTAGAATACCAGAAGATATTGAAGGAAGATATAAGACCAGTTCTCAAAGCTATTGTTTGGGGTTGGCAAGGTGAGAAGCAATAG 1467 0.3817 MMPLLSKVSISLPFFPFSSNETLELVYNYKLGYLICVSGFVPEMEKIGNVLMQKYEFGKLLGQGNFAKVYHARDLRTGDNVAVKVIDKEKVLKVGLVDQTKREISIMRLVKHPNVLQLYEVLATKTKIYFIIEYAKGGELFNKVAKGRFHEDMARKYFQQLISAVDYCHSKGVYHRDLKPENLLLDENGVLKVADFGLSALVESHHQGSMMSTVCGTPAYVAPEVISRKGYDGAKADLWSCGVILYVLLSGHLPFYDLNLIALYKKIGKAEYKCPNWFSFESRRLIAKILNPNPHTRISTAKVMESSWFRKGFNSKSDKMEKKLTNVASSSGSVDSDNVFGVFDNQSGIVEENRALVKPTYLNAFDIISLSAGLDLTCLFANNGDQDNVKFTSMNSASSIMSTLEDIARVLKMKITKKDGGLLKLERSREGRKGQLSIDVEMFEFTESFYLVEMKKSCGDTLEYQKILKEDIRPVLKAIVWGWQGEKQ 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1598 488 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 45 488 - -
Lal4g1598 488 PANTHER - 45 488 - -
Lal4g1598 488 SMART serkin_6 55 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g1598 488 Gene3D Transferase(Phosphotransferase) domain 1 46 357 - -
Lal4g1598 488 ProSiteProfiles NAF domain profile. 357 381 IPR018451 GO:0007165
Lal4g1598 488 ProSiteProfiles Protein kinase domain profile. 55 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g1598 488 Pfam NAF domain 359 417 IPR004041 GO:0007165
Lal4g1598 488 Pfam Protein kinase domain 55 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g1598 488 Gene3D Kinase associated domain 1, KA1 358 482 - -
Lal4g1598 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Lal4g1598 488 CDD CIPK_C 363 477 - -
Lal4g1598 488 SUPERFAMILY Protein kinase-like (PK-like) 51 343 IPR011009 -
Lal4g1598 488 ProSitePatterns Protein kinases ATP-binding region signature. 61 84 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1598 Lal-Chr4 20158107 20160049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1598 44 487 CBL-interacting serine-threonine protein kinases AT5G58380 58.720 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lal4g1598 Pkinase 3.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1598 K07198 - gmx:100816254 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0790 14 9840179 9841848 Lal4g1598 4 20158107 20160049 ECH
Lal9g1714 9 19385994 19388894 Lal4g1598 4 20158107 20160049 ECH
Lal18g1274 18 15353647 15355364 Lal4g1598 4 20158107 20160049 ECH
Lal5g1279 5 15489781 15491109 Lal4g1598 4 20158107 20160049 ECH
Lal3g0417 3 2892213 2893556 Lal4g1598 4 20158107 20160049 ECH
Lal4g1598 4 20158107 20160049 Lal4g1598 4 20158107 20160049 ECH