Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1587 ATGACCAAATCAAGTTCATATGATACTTTTTCATCATCATTCAATCCAACTCTTTTCAAAGTTCGTTTCTTTCAACAAAAACTCAATCTGGGTCGTGCTTCTTTTCCCTTCACGTTGATATACAACAACAAAATGAAGAGTAGGAACTGGAAATTCAACTGCTTCAGTGTTCAAAAGGGATTTTTGTATCTTCTAGCTTTGTGTGTGTTGTTTCAGAGCTTTGGTTTGTGTTGTTCTTTGAATGAAGAAGGTAAAGCACTTCTGAAGTTGAAGCAGAGAATAGTGAGTGACCCTTTTGGTGCTTTGTCAAATTGGGTTGATGATGAAGTAACATTTGACCCTTGTAATTGGTTTGGAGTTGAGTGTTCAGATGGAAAAGTAGTTGTCTTGATTTTGAAAAACCTTTGTCTCGGAGGAAGTCTGGCACCGGAGCTCGCAAATCTTGTTAACATAAAGTCCATCATTTTGCGGAACAATTCTTTTGTTGGGATCATCCCTGCAGGAATTGCACACTTGAAAGAATTGGAGGTTTTAGATTTGGGCTACAACAACTTCAGTGAACCTTTACCTAACGATCTTGGGAGTAATATTTCATTCACAACCCTCTTACTAGACAACAATGATCACCTTGGTGGTTTCTCTCCTGAAATTAATAAATTGAAGGTTCATTCTGAATGTCAAGTAGACAAAAACAATCTAATTAGTATAGATAAAATGCCAGCTTGTACAGGACAATCCAGAAAACGCCATATTGGCCAAAATAAAAAGGCTCATAGGAGCCTACGGCAAACACGTATTCAAGAACATGAAGATATTCATAATCACGCAAGAGATTTTCCTGATACCCTGGCTTTATCCCGTGCGCCATACCGAGATCATCGTTTAACTGAACCACCACTAGTGCCGAAGCTAGCTTCCCCTGAACGAAGTGTTTCTGGTTCTCCTTCTCCCCTGCTTATGCCAAGAAGTAATTTTCCTGACACCCGGGCTTTGTCCCCTTCACCATCCCTACATCCTCATATAGCTGAACCACCACTAGTGCCGAAGCCAGCTTCCCCTGAACGAAGTGTTTCTGATTCTCCTTCTCCCCTGCTTATGCCAAGAAGTAATTTTCCTGATACCCGGGCTTTGTCCCCTTCGCCATCCCTACATCCTCATATAGCTAAACCACCACTAGTGCCGAAGTCAGCTTCCCCTGAACGAAGTGTTTCTGATACTCCGTCTCCCCAGCTTATGCCAGGAAGCAATTTTTCAGATACCCCGACTTTGTCCCCTTCGCCATCCGTAGATCCTCCTTTACCTGAATCACCACTAGTGCCGAATCCACATTCCCCTGAACCAAGTGTTTCTGGTTCTTCTCCCCTGCGTATACCAGGTTCTCCAACATACTCTTCATTAACGGATAACTATGTCACTATATTAGCTGCAGTTGGAGCTGGTGTTTTATTTCTTCTTCTTTCAAGCATTGGCATATATTTATGTAAAACCAACAAAGTTTCTGTAAACCCTTGGGCCACGGGATTGAGCGGACAGCTTCAGAAGGCATTTGTGACAGGCGTTCCAAAGCTAAAGCGATCAGAGCTTGAAGCAGCATGTGAAGATTTTAGTAACGTACTCGGTACTTCATCCATTTGTACAGTGTACAAAGGGACTTTATCTAGCGGCGTTGAAATAGCCGTGGCCTCTGTTTCAGTGGAATCATCTAAAAATTGGTCAAATACTTCAGAAGTCCAATTTAGGAAGAAGATAGAAACATTATCAAAAATAAACCACAAGAATTTTATGAATCTGCTTGGATATTGTATAGAAGACGAGCCTTTCACCAGAATGGTGGTTTTTGAATATGCCCCTAATGGGACACTCTTTGAGCACTTGCACATACAGGAATCCGAGAACTTGGATTGGGGAACAAGACTTAGAATTGCCATGGGCATGGCTTACTGCTTGCAATATATGCACCAGCTAGACCCTCCTTTGCCACATAGCAATCTGAATTCTTCAGCTGTTCAACTCACGGATGACTACGCCTCGAAAATATCCGATCTAAGTTTCTTGAATGAAATAGGAAAGCCTAACAAAAAATCCAGTGCTAAAAAACAGATCGAAATGACATTAGCAAGTAATGTTTACAGTTTTGGTGTTATATTATTTGAGATGGTAACAGGCAAGCACTCTTATTCAGAGGATAACAATGGCCCACTCGACGACTGGGCTTCACACTATTTACAAGGCAACATGCCGATAAAAGAAATGGTCGATCCGACTCTAGCGAATGTCGATGAAGAAATGCTGGAACAAGTTGGTGCTTTGATAAAATGTTGTGTCCAGCATGATACACATAAGAGACCAACAATGAAAGAAGTTAGTTTAAGGTTGAGAGAGATAACAAACATAACACCTAAAGCAGCTGTTCCAAAACTTTCACCACTTTGGTGGGCAGAACTTGAGATTGCTTCTGCAGATGAAATCTGA 2472 0.4138 MTKSSSYDTFSSSFNPTLFKVRFFQQKLNLGRASFPFTLIYNNKMKSRNWKFNCFSVQKGFLYLLALCVLFQSFGLCCSLNEEGKALLKLKQRIVSDPFGALSNWVDDEVTFDPCNWFGVECSDGKVVVLILKNLCLGGSLAPELANLVNIKSIILRNNSFVGIIPAGIAHLKELEVLDLGYNNFSEPLPNDLGSNISFTTLLLDNNDHLGGFSPEINKLKVHSECQVDKNNLISIDKMPACTGQSRKRHIGQNKKAHRSLRQTRIQEHEDIHNHARDFPDTLALSRAPYRDHRLTEPPLVPKLASPERSVSGSPSPLLMPRSNFPDTRALSPSPSLHPHIAEPPLVPKPASPERSVSDSPSPLLMPRSNFPDTRALSPSPSLHPHIAKPPLVPKSASPERSVSDTPSPQLMPGSNFSDTPTLSPSPSVDPPLPESPLVPNPHSPEPSVSGSSPLRIPGSPTYSSLTDNYVTILAAVGAGVLFLLLSSIGIYLCKTNKVSVNPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVLGTSSICTVYKGTLSSGVEIAVASVSVESSKNWSNTSEVQFRKKIETLSKINHKNFMNLLGYCIEDEPFTRMVVFEYAPNGTLFEHLHIQESENLDWGTRLRIAMGMAYCLQYMHQLDPPLPHSNLNSSAVQLTDDYASKISDLSFLNEIGKPNKKSSAKKQIEMTLASNVYSFGVILFEMVTGKHSYSEDNNGPLDDWASHYLQGNMPIKEMVDPTLANVDEEMLEQVGALIKCCVQHDTHKRPTMKEVSLRLREITNITPKAAVPKLSPLWWAELEIASADEI 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1587 823 MobiDBLite consensus disorder prediction 355 377 - -
Lal4g1587 823 ProSiteProfiles Protein kinase domain profile. 533 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g1587 823 Pfam Protein tyrosine and serine/threonine kinase 535 789 IPR001245 GO:0004672|GO:0006468
Lal4g1587 823 PANTHER BNAA09G55080D PROTEIN 47 280 - -
Lal4g1587 823 PANTHER BNAA09G55080D PROTEIN 397 821 - -
Lal4g1587 823 SUPERFAMILY Protein kinase-like (PK-like) 516 792 IPR011009 -
Lal4g1587 823 MobiDBLite consensus disorder prediction 296 456 - -
Lal4g1587 823 Gene3D Phosphorylase Kinase; domain 1 506 615 - -
Lal4g1587 823 MobiDBLite consensus disorder prediction 309 331 - -
Lal4g1587 823 Pfam Leucine rich repeat N-terminal domain 81 123 IPR013210 -
Lal4g1587 823 PANTHER PROTEIN MALE DISCOVERER 2 397 821 - -
Lal4g1587 823 PANTHER PROTEIN MALE DISCOVERER 2 47 280 - -
Lal4g1587 823 SUPERFAMILY L domain-like 82 236 - -
Lal4g1587 823 MobiDBLite consensus disorder prediction 425 444 - -
Lal4g1587 823 MobiDBLite consensus disorder prediction 399 424 - -
Lal4g1587 823 Gene3D Ribonuclease Inhibitor 78 276 IPR032675 -
Lal4g1587 823 Gene3D Transferase(Phosphotransferase) domain 1 616 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1587 Lal-Chr4 20041217 20045601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1587 519 792 Receptor kinase-like Gene Family AT3G19300 31.849 4.22e-37 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lal4g1587 PK_Tyr_Ser-Thr 2.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1587 - - lang:109327190 1292.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1587 4 20041217 20045601 Lal4g1587 4 20041217 20045601 ECH
Lal4g1587 4 20041217 20045601 Lal21g1261 21 15828115 15832417 LSH
Lal4g1587 4 20041217 20045601 Lal17g1585 17 17264554 17269566 LSH