Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1577 ATGGCATCCAGAGCCGTTAAAACTCTGATTTTGGCTTCTTCGTTATGGCTTTTCCTTCTCTTTGCAGTCATTACATTCTTACAACTTGTAATTGTTGAGAAAGGAACTTCTCAATCTCAACAAATTCAATCTGGTACCCTTTTGGAAGATAATTTGGAGGCAGTGACCCACAAGGTGTATTTTGATGTAGTGATCAATGAAAATTTTGTGGGTCGCATTGTCATGGGCCTTTTCGGGACTACAGTTCCAAAAACTGTAGAAAATTTCCGAGCGCTTTGCACGGGAGAGAAAGGGGTGGGTAGAAGTGGGAAACCTCTTCACTATAAAGGTAGCTCATTCCATAGGATTATACCAAGCTTTATGGTCCAGGGAGGTGATTTCACCCTCGGTGATGGACGGGGTGGAGAATCGATCTATGGTGACAAATTTACTGATGAAAACTTCAAGCTGAAGCATACCGGGCCAGGATACTTGTCAATGGCAAATTCTGGCGAAGACACCAATGGCTCTCAGTTTTTCATTACAACAGTAAAAACCAGCTGGCTGGATGGACACCATGTAGTGTTCGGCAAGGTACTTTCCGGGATGGACGTTTTGCATAAGATTGAAGCAGAAGGAAGTGAAAGTGGCGTGCCCAAAAGCAAGGTTGTCATAGTAGACAGTGGGGAATTACCTTCATCTTACTTAACAGATTGA 696 0.4325 MASRAVKTLILASSLWLFLLFAVITFLQLVIVEKGTSQSQQIQSGTLLEDNLEAVTHKVYFDVVINENFVGRIVMGLFGTTVPKTVENFRALCTGEKGVGRSGKPLHYKGSSFHRIIPSFMVQGGDFTLGDGRGGESIYGDKFTDENFKLKHTGPGYLSMANSGEDTNGSQFFITTVKTSWLDGHHVVFGKVLSGMDVLHKIEAEGSESGVPKSKVVIVDSGELPSSYLTD 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1577 231 CDD cyclophilin_ABH_like 57 222 - -
Lal4g1577 231 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 60 223 IPR002130 GO:0000413|GO:0003755
Lal4g1577 231 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-2 30 225 - -
Lal4g1577 231 Gene3D - 46 228 IPR029000 -
Lal4g1577 231 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 65 221 IPR002130 GO:0000413|GO:0003755
Lal4g1577 231 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 108 125 IPR020892 GO:0003755|GO:0006457
Lal4g1577 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 77 92 IPR002130 GO:0000413|GO:0003755
Lal4g1577 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Lal4g1577 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 156 171 IPR002130 GO:0000413|GO:0003755
Lal4g1577 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 171 183 IPR002130 GO:0000413|GO:0003755
Lal4g1577 231 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 184 199 IPR002130 GO:0000413|GO:0003755
Lal4g1577 231 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 30 225 - -
Lal4g1577 231 SUPERFAMILY Cyclophilin-like 54 224 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1577 Lal-Chr4 19957487 19960768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1577 71 228 U-box Gene Family AT5G67530 41.875 2.56e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1577 K01802 - gmx:100792649 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1577 4 19957487 19960768 Lal4g1577 4 19957487 19960768 ECH