Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1555 ATGAAGAATATGGAACATCATATGACATTGGAAGAAACTGCTTCAGCTGGATTAAAGAGCATGGAACATCTCATTCGTCTTCTTTCATCTCAAACACAAACCCAAACACCTTTTATCAACAACAACAACGTCAACCTCGTGTGCTCCGAAATCACAGATTTCACTGTCTCTAAGTTTAAACAAGTCATCAACTTAATGAACCGAACTGGTCATGCACGTTTTCGTCGTGCACCTTCTCGACTCGATACAAAACCTGAACCCGAACCTGAAACACAAAACCAACAACAAGGTTTGAATTTAGATTTTTCAAAACTAGGTATTGTTAAAGAAAAGTCAAATAATAATAAGGATGATACTCTTAGTATTTCTACTACCACTTCCTCTTTCATGTCCACTATCACTGTCACCGGCGATGGCAGCGTCTCCGACGGCAAAATTGGACCATTTCTCTCTCCTCCGGCTCCGGCTGTTTCTGCCGGTAAGCCACCTATCTCTTCTTCTCACCGGAAAAGGTGTCATGACGTCAGCTTCTCCGGCAATTGCCATTGCTCCAAGAGAAGGAAATCACGTGTGAAACGAACGATTCATGTGCCGGCGATAAGTTCAAAGATCGCCGATATACCGCCGGATGAGTACTCGTGGAGGAAGTATGGCCAAAAACCGATCAAGGGTTCACCCTATCCTCGTGGATACTACAAATGCAGCACCGTGAGAGGGTGTCCGGCGAGGAAGCGCGTGGAGCAAGCACAAAACGATCCCAATATGCTGATTGTGACTTACGAGGAAGAGCACCTCCACGCGCAACCGTGTCCGTCGGGAACCATCGCTGCCGGTGTCAATTTCAGCCTCAAGTCAAGTTAG 861 0.4599 MKNMEHHMTLEETASAGLKSMEHLIRLLSSQTQTQTPFINNNNVNLVCSEITDFTVSKFKQVINLMNRTGHARFRRAPSRLDTKPEPEPETQNQQQGLNLDFSKLGIVKEKSNNNKDDTLSISTTTSSFMSTITVTGDGSVSDGKIGPFLSPPAPAVSAGKPPISSSHRKRCHDVSFSGNCHCSKRRKSRVKRTIHVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKRVEQAQNDPNMLIVTYEEEHLHAQPCPSGTIAAGVNFSLKSS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1555 286 Pfam WRKY DNA -binding domain 210 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal4g1555 286 SUPERFAMILY WRKY DNA-binding domain 206 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal4g1555 286 SMART WRKY_cls 208 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal4g1555 286 ProSiteProfiles WRKY domain profile. 203 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal4g1555 286 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 3 271 - -
Lal4g1555 286 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 3 271 IPR044810 GO:0003700
Lal4g1555 286 Gene3D WRKY domain 193 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal4g1555 286 MobiDBLite consensus disorder prediction 152 171 - -
Lal4g1555 286 Pfam Plant zinc cluster domain 170 206 IPR018872 -
Lal4g1555 286 MobiDBLite consensus disorder prediction 70 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1555 Lal-Chr4 19748765 19752627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1555 1 268 WRKY Transcription Factor Family AT2G24570 50.814 2.40e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal4g1555 WRKY 2.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1555 - - gmx:100127391 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1555 4 19748765 19752627 Lal4g1555 4 19748765 19752627 ECH
Lal21g1214 21 15121742 15123989 Lal4g1555 4 19748765 19752627 LSH
Lal7g1089 7 16872578 16873626 Lal4g1555 4 19748765 19752627 PCT
Lal4g1555 4 19748765 19752627 Lal7g1089 7 16872578 16873626 PCT