Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1537 ATGGAGGAAATGTTCCCGACGGTTGCGGTACCGTTTACGGTTGGGAATTTAATCCAAAAGGAGATAACTGGTTTAGAGCTTGTGGCAAATACAGCAGCAACTTTAATATTAAATCCTGCAATTGAGGATTGTCACTCTTACTCTGTTGAAACTGAAAAACAAGACACGGATATTATTAGTCCACGACATCGAAATATAGTATATACAGAGATTAAGGGGAATCAGGTTGTAGCTGAGCCTGTCTCAGAAATGGTAATTCCTTGTAGAGAGGATTCTGCTACATTGAGTACTAATTGTTCTGAAATTGATTCACCAATAGCCATCAAGTGTAAGTCCAGTTCGAATGAGCCACACGGCGAGATAGAGGAAGACGGGAATATGGCTTCGGTTGCAAAGGAAAATGGAAGTGGATCAGATGGCTGTGATCCAAAACCAACTGCTGAGCTGATAGAGAAGAAAATATGCAGCCAGAATGCTTTGGAAATGAGTGGCGATGGCGCTCGTTATGGTTTCTCGTCAGTTCGTGGAATGAGACAGGAGATGGAAGATGCTATTGCTGTCAAGCCTCAACTTTTTCAAGTCCCTTCACAGATGCTAATGGATGATGACCATGTTAACGAAAACACAAAATACTCATTGGCTCACTTTTTCGGCGTCTACGATGGACATGGGGGCTGTCAGGTTGCCAATTACTGCCAGGAACATCTTCACTCAGTGTTGGTTAAGGAAATCGAAGCTGTAGAAGCTGAAAAGAATGGGAGAAACAAAAATTGGCAGGACCATTGGAAGAAAGCATTCTTCAATTGTTTTCATAAAGTAGATGATGATGTTGGAAGAGTTCATGCTAATAGTGGAAGCAATAGTGAGAATGAATCTGAGTCTGAGTCTAGTATTGAACTTCTTGCTGAGACTGTTGGCTCCACTGCAGTGGTTGCTGTTTTAACTCGAACCGACATAATAGTTGCAAATTGTGGCGATTCAAGAGCAGTTCTATATCGCGGAAAGGAAGCACTGCCATTGTCTTCTGACCACAAACCAAATAGAGAGGACGAGTGGACAAGGATAGAAGCTGCCGGAGGAAAGGTCATACAGTGGAACGGATACCGAGTTCTTGGTGTTTTGGCAGTGTCAAGGTCCATAGGTGATCAATACTTGAAACCATGGATAATTCCAGAACCAGAAGTCATGTTTGTAAACCGAGAGAAAAACGACGAGTGCCTTATTCTAGCCAGTGATGGTTTATGGGATGTAATGACAAATGAGGAAGCATGTGACATTGCGCGAAAGCGAATCTTAATTTGGCACAAGAAGAATGGCAACAATGTATCAATAGGACAAGGCCATGGAGCTGATCCTGCAGCTCAGTATGCTGCAGAGTATCTTTCTAGACTTGCTCTCCAAAGGGGAAGCAAAGATAATATCTCTATTATTGTTATAGACTTAAAGGCTCAAAGAAAATTGAAGACCAAAGACATAAATTGA 1482 0.4204 MEEMFPTVAVPFTVGNLIQKEITGLELVANTAATLILNPAIEDCHSYSVETEKQDTDIISPRHRNIVYTEIKGNQVVAEPVSEMVIPCREDSATLSTNCSEIDSPIAIKCKSSSNEPHGEIEEDGNMASVAKENGSGSDGCDPKPTAELIEKKICSQNALEMSGDGARYGFSSVRGMRQEMEDAIAVKPQLFQVPSQMLMDDDHVNENTKYSLAHFFGVYDGHGGCQVANYCQEHLHSVLVKEIEAVEAEKNGRNKNWQDHWKKAFFNCFHKVDDDVGRVHANSGSNSENESESESSIELLAETVGSTAVVAVLTRTDIIVANCGDSRAVLYRGKEALPLSSDHKPNREDEWTRIEAAGGKVIQWNGYRVLGVLAVSRSIGDQYLKPWIIPEPEVMFVNREKNDECLILASDGLWDVMTNEEACDIARKRILIWHKKNGNNVSIGQGHGADPAAQYAAEYLSRLALQRGSKDNISIIVIDLKAQRKLKTKDIN 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1537 493 CDD PP2Cc 168 481 IPR001932 -
Lal4g1537 493 SMART PP2C_4 158 479 IPR001932 -
Lal4g1537 493 Gene3D - 156 491 IPR036457 -
Lal4g1537 493 ProSiteProfiles PPM-type phosphatase domain profile. 168 481 IPR001932 -
Lal4g1537 493 Pfam Protein phosphatase 2C 168 474 IPR001932 -
Lal4g1537 493 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 121 490 - -
Lal4g1537 493 PANTHER ALPHABET, ISOFORM E-RELATED 121 490 - -
Lal4g1537 493 ProSitePatterns PPM-type phosphatase domain signature. 216 224 IPR000222 GO:0043169
Lal4g1537 493 SUPERFAMILY PP2C-like 162 482 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1537 Lal-Chr4 19485349 19489385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1537 169 490 PP2C-type Phosphatase Gene Family AT1G17550 58.716 7.48e-129 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1537 K14497 - gmx:100812974 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1537 4 19485349 19489385 Lal4g1537 4 19485349 19489385 ECH
Lal17g1512 17 16490932 16496949 Lal4g1537 4 19485349 19489385 LSH
Lal14g1667 14 16901456 16904881 Lal4g1537 4 19485349 19489385 PCT
Lal4g1537 4 19485349 19489385 Lal14g1667 14 16901456 16904881 PCT