Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1534 ATGGAAGCTGGCCTAGTGGTTAAGGAGTCCGCTCTAGTGAGTATAAGTGTAGGCTCTCATGTCTGGGTTGAAGATCCAACGTATGCATGGGTTGGTGGAGAAGTTTCTAAAGTCAATGGTGAAGAACTTCATGTTCGCACGACAAATGGGAAAACAATTGTCACAAATATCTCAAAGGTTTTTCCCAAAGATTGTGAAGCCCAACATGGAGGTGTGGACGACATGACAAAACTACCATATTTGCATGAACCAGGAGTTCTTCATAACTTGGCAACTAGATACGAACTCAATGAAATCTATACCTATACTGGCAATATCCTGATTGCGGTAAACCCATTTCAAAGAATTCCGCATTTATATGATGCTCACATGATGGAACAGTATAAGGGAGCTGCATTTGGAGAGTTGAGTCCCCATGTTTTTGCTGTTGCAGATGTTGCATACAGGGCAATGTTTAATGAGGGGAAAAGCAACTCAATCCTGATTAGTGGTGAGAGTGGGGCGGGTAAGACTGAGACAACAAAGATGCTTATGCAGTATCTTGCTTACCTTGGGGGCCGATCTGGATTGGAAGGGCACACGGTTGAACAACAAGTTCTGGAATCTAATCCAGTTCTTGAAGCATTTGGGAATGCAAAAACAGGTAGAAACAATAACTCAAGTCGTTTTGGTAAATTTGTGGAGATCCAGTTTGACAACAAGGGAAGGATCTCTGGGGCAGCCATACGGACATACTTGCTTGAAAGGACCCGTGTTTGTCAAATTTCAGATCCAGAAAGAAATTACCATTGCTTTTATCTTCTTTGTGCTGCACCGGCTGAGGTAAAAGAGAAGTATAAGGTGGGACATCCAAGCTCCTTCCATTACTTAAATCAATCCAACTGCTATGAACTGGATAGTGTCAATGATGCAGACGAGTATGTCGCAATTCGAAGGGCAATGGATAGTATTGGAATCAGCGAGGAAGAGCAGGAGGCCATTTTTCGAGTTGTTGCAGCAGTTCTACACCTTGGAAATGTTGAATTTTCAAAAGGAGAGGAGATTGACTCTTCAGTCATCAAGGATGAAAATTCTAGGTTCCATCTTAATATGACTGCCGATCTTCTTAAGTGTGATACTATGAGCTTGGAAGATGCATTAATCAAGCGAGCGATAGTAACACCTGAGGAGGTTATTACAAGAACCCTTGATTCTATTGCAGCTGTTGGTAGCAGAGATGCACTAGCTAAAACCATTTATTCACGTTTGTTTGATTGGCTTGTGGAGAAGATTAATATTTCAATTGGGCAAGATCCAAATTCAAAATCTATTATTGGAGTTCTTGACATCTACGGGTTTGAGAGTTTTAAGGTCAACAGGTTAGCTAATACTTCATCTGGCATGTATGATTCGCATGTCTTTAAAATGGAACAAGAAGAATACACCCAAGAAGAGATCAATTGGAGTTACATAGAGTTTGTTGACAACCAAGATGTTTTGGATCTAATTGAGAAAAAACCCGGTGGAATAATTGCACTTCTTGATGAAGCCTGTATGTTTCCTAAGTCCACACATGACACATTTGCTCAGAATTTGTACCAAACGTTCAAAAACAACAAGCGGTTTATCAAACCTAAACTTTCTCAGACTAGTTTTACCATATCTCATTATGCAGGAGAGGTTATATATCAGGCCGATATGTTTCTAGAAAAAAACAAGGATTACGTGGTTGCAGAACATAAGGATCTGCTGACACTCTCAAAATGCTCATTTGTGGCAGGTCTATTCCCTTATTCTCCAGAGGTGTCTTCAAAATCGTCCAAGTTCTCTTCAACAGGGTCTCGTTTTAAGTTACAACTTCAATCTCTGATGGAGATCCTCAATTCAACAGAACCTCACTATATCAGATGTGTGAAGCCAAATAATGTCCTCAAGCCTGGCGTTTTTGAAAATGTCAATATTATCCACCAATTACGCTGTGGTGGTGTTCTTGAGGCAATTAGAATCAGCTGTGCTGGATATCCTACCAGGCAGACCTTTTATGAGTTTCTTAACCGATTTGGTGTTCTTTACCCTGAAGTTCTATATGGAAACTATGATGAGAAGGTTGCATGCCAAAAGATCCTGGATAAAATTTCTATGAAAGGCTATCAGATAGGCAAGACAAAGGTTTTCCTAAGAGCTGGTCAGATGGCCGAGTTGGATTCAAGAAAAGCAATGGTTCTTGGAAATGCTGCTAGAATAATCCAGAGACAAATACGCACTCATATTGCACGCAAGGCATTCATTGAATTACAGCAAGCTGCAATTATTTTGCAATCTAATTTGCGAGGCATATTAGCCTGGAAGCTGTATGGGCAGTTACGACGTGAAGCAGCAGCTGTGAAAATTGAGAAGAACTTCAGAGGATACATTGCCAGGAAATCGTACTTAAAAGCCCGGTCATTTGCAATCACAATACAGACAGGTTTTAGGGCTATGAAGGCTCGCGATAAATTTAGATTTAGAATGCAAACAAAGGCTGCAATTCTTGTCCAGGCTCATATACGACAGCATATTGCACATTCCTATTATAAAAGACTACAAAGAGCAGCGGTTGTCACTCAGTGTGCTTGGAGGAGAAGGGTTGCTAGGAGGGAACTTAGAAAGCTTAAAATGGCTGCAAGAGAAGCAGGGACCCTTAAAGAAGCAAAAGACAAACTGGGAAAGCGTGTTGAAGAACTTACATGGCGTTTGCAAATTGAGAAGCGTTTGAGAACTGATTTGGAAGAGGAAAGGGCACAACAAATTGATAAATTACAGAATTGTTTGCACGCAATGCAAATACAAGTAGAAGAAGCAAATTCCAAGGTCATCAAAGAGCGTGAGGCAGCTCGGAAAGCCATTGAACAAGCACCTCCAATTATTAAGGAGACTCCTGTTATAATTCAAGATACTGAAAAGATTAATTCCTTGATGGATGATATCAATAGTTTGAAAGAATCACTGGTGTTGGAAAGAAAGGCTAAAGAAGAGGCCAGAAAAGCTCAGGCTGAGGCTGAGGCTAGAAATGAAGTGCTAGTTAAAAAAGTTGACAATTATGAGCGCAAAGTGGATCAACTCCAAGAATTGGTTCAGAGGCTGGAGGATAAAATTTCAAATATGGAATCAGATAATCAAGTTCTTCGTCTGCGAGCCCTTGCTGTATCTCCAACTGGAAAAGCTCTAACTGGTGGACCAAAGACAGTGACTATTCATAGGACACCAGAAAAAAGGAATGCTCTAAATGGTGGAGAAAAAGAATTATCAGGTATGACTCTTGCTGTATCAAATGTACGTGAACCTGAATCTGAGGGAAAACCACAAAAATTTCTCAATGAGAAGCAGCAAGAGAATCAAGACTTGTTGATCAAGTGCATATCACAAGATTTGGGGTTTTCTGGTGGCAAACCTGTTGTTGCGTGTGTTATATATAGATGCCTTCTTCGCTGGAGATCATTTGAAGTCGAAAGAACGAATGTATTTGACCGTATCATTCAAACAATTGCTTCAGTTGTTGAGGCTCAGGATAATACTGATGTATTAGCCTATTGGTTGTCTAATACTTCTACTTTGTCGTTGCTACTCCAACGGACGCTCAAAGCAAGTGGGACAGCTAGTTCTACACCTCAACGGCGAAGAACAGCATCATCTCCTCTGTATGGAAGAGTGTCTCAGGGGCTGAGGGCATCTCCCCAAAGTTCTGTGTCATCATTAAACAGTAGAGGACTTTGCAGATTGAATGATTTACGGCAAGTGGAAGCAAAATATCCTGCACTTCTGTTTAAGCAACAGCTCACTGCCTTCCTTGAAAAAATATATGGAATGATAAGAGACAATCTAAAAAAGGAGATATCTCCATTACTTGGATTGTGCATCCAGGCTCCAAAGACCTCACGGCAAAGCTCAATAAAAGGACGTATACATGCTAATGCAGTTTCTCAGAAAGCTTTAATTGCTCACTGGCAAAGTATTGTGAAGAGCTTAAACAAATATCTAAAGATTATGAAAGCAAACTATGTTCCCTCCTTGTTGATACGTACCGTGTTCACCCAAACATTCTCCTTCATTAATGTTCAATTATTCAACAGTCTATTGTTGCGTCGCGAGTGTTGTTCATTCAGTAATGGTGAGTTTGTGAAGTCTGGTTTGAGTGAATTAGAACAGTGGTGCGTTGAGGCAACAGAAGAGTATGTTGGCTCAGCTTGGGAAGAACTAAAGCATATCAGACAGGCTGTTCGATTCCTAGTGACACATCAAAAACCCAAAAAGACGATGAATGAAATAACAAAGGAACTTTGCCATGTTGGTGCCTTCTTTCTTTTAACTTTCTGTAATATCACAGTTCTCTTTGATTTTCCTCCTAACTATGATCTTTTGGTGCCGCAGGTTCTCAGTATACAACAGTTATACAGGATCAGTACAATGTACTGGGATGACAAATATGGCACACACACTGTGTCCACAGATGTTATAACAAGCATGAGAACAATGATGTCTGAGGACACTAACAATGCTATCAGCAGTTGTTTTCTATTAGATGATGACACAAGCATACCATTTTCAGTAGATGACATTTCCAAATCAATTCAACGAATACAAGTAGCAGATGTGGAGCCGCCTCCATTCATTCGCGAAAACTCGAGATTCGGGTTCTTATTATCACGCTCCGAGTCATTCAAATAA 4683 0.4044 MEAGLVVKESALVSISVGSHVWVEDPTYAWVGGEVSKVNGEELHVRTTNGKTIVTNISKVFPKDCEAQHGGVDDMTKLPYLHEPGVLHNLATRYELNEIYTYTGNILIAVNPFQRIPHLYDAHMMEQYKGAAFGELSPHVFAVADVAYRAMFNEGKSNSILISGESGAGKTETTKMLMQYLAYLGGRSGLEGHTVEQQVLESNPVLEAFGNAKTGRNNNSSRFGKFVEIQFDNKGRISGAAIRTYLLERTRVCQISDPERNYHCFYLLCAAPAEVKEKYKVGHPSSFHYLNQSNCYELDSVNDADEYVAIRRAMDSIGISEEEQEAIFRVVAAVLHLGNVEFSKGEEIDSSVIKDENSRFHLNMTADLLKCDTMSLEDALIKRAIVTPEEVITRTLDSIAAVGSRDALAKTIYSRLFDWLVEKINISIGQDPNSKSIIGVLDIYGFESFKVNRLANTSSGMYDSHVFKMEQEEYTQEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHDTFAQNLYQTFKNNKRFIKPKLSQTSFTISHYAGEVIYQADMFLEKNKDYVVAEHKDLLTLSKCSFVAGLFPYSPEVSSKSSKFSSTGSRFKLQLQSLMEILNSTEPHYIRCVKPNNVLKPGVFENVNIIHQLRCGGVLEAIRISCAGYPTRQTFYEFLNRFGVLYPEVLYGNYDEKVACQKILDKISMKGYQIGKTKVFLRAGQMAELDSRKAMVLGNAARIIQRQIRTHIARKAFIELQQAAIILQSNLRGILAWKLYGQLRREAAAVKIEKNFRGYIARKSYLKARSFAITIQTGFRAMKARDKFRFRMQTKAAILVQAHIRQHIAHSYYKRLQRAAVVTQCAWRRRVARRELRKLKMAAREAGTLKEAKDKLGKRVEELTWRLQIEKRLRTDLEEERAQQIDKLQNCLHAMQIQVEEANSKVIKEREAARKAIEQAPPIIKETPVIIQDTEKINSLMDDINSLKESLVLERKAKEEARKAQAEAEARNEVLVKKVDNYERKVDQLQELVQRLEDKISNMESDNQVLRLRALAVSPTGKALTGGPKTVTIHRTPEKRNALNGGEKELSGMTLAVSNVREPESEGKPQKFLNEKQQENQDLLIKCISQDLGFSGGKPVVACVIYRCLLRWRSFEVERTNVFDRIIQTIASVVEAQDNTDVLAYWLSNTSTLSLLLQRTLKASGTASSTPQRRRTASSPLYGRVSQGLRASPQSSVSSLNSRGLCRLNDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPKTSRQSSIKGRIHANAVSQKALIAHWQSIVKSLNKYLKIMKANYVPSLLIRTVFTQTFSFINVQLFNSLLLRRECCSFSNGEFVKSGLSELEQWCVEATEEYVGSAWEELKHIRQAVRFLVTHQKPKKTMNEITKELCHVGAFFLLTFCNITVLFDFPPNYDLLVPQVLSIQQLYRISTMYWDDKYGTHTVSTDVITSMRTMMSEDTNNAISSCFLLDDDTSIPFSVDDISKSIQRIQVADVEPPPFIRENSRFGFLLSRSESFK 1560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1534 1560 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Lal4g1534 1560 Coils Coil 982 1051 - -
Lal4g1534 1560 Gene3D Myosin VI head, motor domain, U50 subdomain 320 601 - -
Lal4g1534 1560 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Lal4g1534 1560 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Lal4g1534 1560 PRINTS Myosin heavy chain signature 100 119 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal4g1534 1560 PRINTS Myosin heavy chain signature 157 182 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal4g1534 1560 PRINTS Myosin heavy chain signature 204 231 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal4g1534 1560 PRINTS Myosin heavy chain signature 437 465 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal4g1534 1560 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal4g1534 1560 Gene3D - 447 623 - -
Lal4g1534 1560 Gene3D Kinesin motor domain 73 662 IPR036961 -
Lal4g1534 1560 ProSiteProfiles IQ motif profile. 831 857 IPR000048 GO:0005515
Lal4g1534 1560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 785 IPR027417 -
Lal4g1534 1560 Gene3D - 260 318 - -
Lal4g1534 1560 Coils Coil 923 957 - -
Lal4g1534 1560 CDD MyosinXI_CBD 1113 1523 IPR037975 GO:0007015
Lal4g1534 1560 Pfam Myosin head (motor domain) 72 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal4g1534 1560 ProSiteProfiles IQ motif profile. 737 761 IPR000048 GO:0005515
Lal4g1534 1560 Coils Coil 898 918 - -
Lal4g1534 1560 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Lal4g1534 1560 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 16 65 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal4g1534 1560 PANTHER MYOSIN 14 1441 - -
Lal4g1534 1560 PANTHER MYOSIN 1462 1553 - -
Lal4g1534 1560 Gene3D - 833 882 - -
Lal4g1534 1560 Gene3D - 735 784 - -
Lal4g1534 1560 Gene3D - 785 832 - -
Lal4g1534 1560 Pfam DIL domain 1348 1433 IPR002710 -
Lal4g1534 1560 Pfam Myosin N-terminal SH3-like domain 17 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal4g1534 1560 ProSiteProfiles Myosin motor domain profile. 70 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal4g1534 1560 PANTHER MYOSIN-5 1462 1553 - -
Lal4g1534 1560 PANTHER MYOSIN-5 14 1441 - -
Lal4g1534 1560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 883 IPR027417 -
Lal4g1534 1560 Pfam IQ calmodulin-binding motif 832 852 IPR000048 GO:0005515
Lal4g1534 1560 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Lal4g1534 1560 Pfam IQ calmodulin-binding motif 808 827 IPR000048 GO:0005515
Lal4g1534 1560 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Lal4g1534 1560 SMART MYSc_2a 64 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal4g1534 1560 CDD MYSc_Myo11 84 720 IPR036018 -
Lal4g1534 1560 ProSiteProfiles Dilute domain profile. 1162 1500 IPR002710 -
Lal4g1534 1560 SMART DIL_2 1347 1482 IPR002710 -
Lal4g1534 1560 Gene3D - 667 730 - -
Lal4g1534 1560 SMART iq_5 782 804 IPR000048 GO:0005515
Lal4g1534 1560 SMART iq_5 830 852 IPR000048 GO:0005515
Lal4g1534 1560 SMART iq_5 734 756 IPR000048 GO:0005515
Lal4g1534 1560 SMART iq_5 853 875 IPR000048 GO:0005515
Lal4g1534 1560 SMART iq_5 757 779 IPR000048 GO:0005515
Lal4g1534 1560 SMART iq_5 805 827 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1534 Lal-Chr4 19439798 19462517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1534 75 1557 Myosins gene family AT5G20490 73.592 0.0 2273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1534 K10357 - gmx:100777802 2481.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1534 4 19439798 19462517 Lal4g1534 4 19439798 19462517 ECH