Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1530 ATGCTTACATGCATAGCTCGAACCAAGAAACTCGGTGATGACTCACCGAGTCATCACGACGATTCTGATCCAAACAACAATGCAAAAAACTACCAACCTGTTAAGTCAATCACTTCTCAGATTAAAGATATGGCTTTGAAGGCATCAGGGGCATATAAGAATTGTGGAAGATGTACAGGACCGAGTGGACTCGGTGAGAGGAACAAGGGTGAGTCATTATCATCAGAGTTGGAATCGGAGCGGTTCCGTAGGTTGTACAGGAGAAACGGGAGTGGAAGCTCGTGTAGGAGGACGTGGGGGAAGGAATTGGAGGAGAGGTTGAAGGGGATTTCCAGTGGTGAGGGGACGCCGAGCTCTGACGGTGGTGGAGGTAGCGGAAGAAGGGTGGCGGTGGTGGTTGAAGAGGAAGAGGGTAAAGAATGGGTGGCTCAGGTGGAGACGGGTGTTTTGATCAGTTTTGTGTCGCTTCCGGGAGGCGGGAACCACCTCAAGCGGGTACGCTTCAGTGGGGAAATATTTAACAAATGGCAAGCTCAAAGATGGTGGACAGAGAACTTTGATAAGGTGATGGAACTTTACAATGTTCAAAGGGTTAACCACCAAGCTTTCCCTCTTCCAACTCCACCAAGATCAGAAGAAGATGAGAGTTCAAAGCATGAATCAGTAGAAGACATCCCAGTGACACCACCACTAACCAAGGATAGACTAGCAATGGGGTATTCATCCTCAGATTCCTTTGATGTTCAGTCAATGGAATCAAGGCACCATAATGATGTTCACTCAACCCCAAAGTTATCTACCATTAGTGCTGCCAAGACAGAGATATCTTCAATGGATGCTTCTATAACAACTTGCTCTTCTACAGAAGCTGATTACTCACAGGATCTATCAATCAGTACCATGGATACTGAATGGGTTGAGGAGGACGAACCCGGGGTTTACATTACCATCAAACCAATTACGGGTGGTAAAAGGGAGATCGCACGAGTCAGGTTCAGCCGTGAAAAATTTGGGGAGGTGCATGCTAGGCTATGGTGGGAAGAGAACCGTGCAAGAATACATGAACAATACTTGTGA 1077 0.4698 MLTCIARTKKLGDDSPSHHDDSDPNNNAKNYQPVKSITSQIKDMALKASGAYKNCGRCTGPSGLGERNKGESLSSELESERFRRLYRRNGSGSSCRRTWGKELEERLKGISSGEGTPSSDGGGGSGRRVAVVVEEEEGKEWVAQVETGVLISFVSLPGGGNHLKRVRFSGEIFNKWQAQRWWTENFDKVMELYNVQRVNHQAFPLPTPPRSEEDESSKHESVEDIPVTPPLTKDRLAMGYSSSDSFDVQSMESRHHNDVHSTPKLSTISAAKTEISSMDASITTCSSTEADYSQDLSISTMDTEWVEEDEPGVYITIKPITGGKREIARVRFSREKFGEVHARLWWEENRARIHEQYL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1530 358 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 358 - -
Lal4g1530 358 MobiDBLite consensus disorder prediction 107 127 - -
Lal4g1530 358 ProSiteProfiles BRX domain profile. 139 194 IPR013591 -
Lal4g1530 358 MobiDBLite consensus disorder prediction 11 25 - -
Lal4g1530 358 Pfam Transcription factor BRX N-terminal domain 28 58 IPR027988 -
Lal4g1530 358 MobiDBLite consensus disorder prediction 203 236 - -
Lal4g1530 358 MobiDBLite consensus disorder prediction 1 37 - -
Lal4g1530 358 Pfam Transcription factor regulating root and shoot growth via Pin3 139 193 IPR013591 -
Lal4g1530 358 Pfam Transcription factor regulating root and shoot growth via Pin3 303 357 IPR013591 -
Lal4g1530 358 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 358 IPR044532 -
Lal4g1530 358 ProSiteProfiles BRX domain profile. 303 358 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1530 Lal-Chr4 19408366 19421813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1530 1 358 Major Intrinsic Protein MIP AT1G31880 41.417 5.07e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1530 - - gmx:100794109 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1530 4 19408366 19421813 Lal4g1530 4 19408366 19421813 ECH
Lal14g1661 14 16862528 16868061 Lal4g1530 4 19408366 19421813 PCT
Lal19g1200 19 15419632 15423684 Lal4g1530 4 19408366 19421813 PCT
Lal4g1530 4 19408366 19421813 Lal14g1661 14 16862528 16868061 PCT
Lal4g1530 4 19408366 19421813 Lal19g1200 19 15419632 15423684 PCT