Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1515 ATGTCTTCTGATTCCAACAATGGAGTTTCACCAACCAACACTCTTCAATCCATTCTCTACAACCCTGGTTCCCTTCATCTTCTTGATCAGACAAAGCTCCCTCTAGAATCAGTTTACTTGGAAATTCGAGATTCAACAGATGGATGGAATGCTATTCGGGATATGGTGGTTCGGGGTGCACCGGCTATTGCTATTGCAGGAGCGCTCTCTTTGGCTGTGGAAGTGTTCAATTTAGATGGTTTTAGTGGGTCACCCGCGGACGCTGCTTCCTTCCTCCAAAACAAATTAGAATATCTTGTCTCAAGTCGGCCAACTGCGGTGAACCTAGCAGATGCTGCAACAAAGCTCAAAGAAGTCATATCTAAAGCTGCTGCTACCACTGCAGAGGCAAAGGGTGTTTTTCAGGCCTATATAGAAGCTGCCGAGGTTATGCTCGAGGATGACGTTGCCTCGAATAAAGCTATTGGTTCTTATGGAGCTAGTTTTATTCAAAACCAAACACAGAAACATAAGCTTTCTGTTTTGACCCACTGCAATACTGGAAGTCTAGCCACAGCTGGATATGGTACTGCTCTGGGTGTGATCCGTGCACTTCACGGTGGAGGATCTTTAGAACGAGCTTATTGCACAGAAACACGTCCATTCAATCAAGGATCAAGACTCACTGCCTTTGAGTTGGTGCATGAGAAAATACCAGCTACTCTTATAGCGGATTCCGCAGTAGCTGCATTAATGAAAGCAGGACGTGTGGATGCTGTTGTTGTTGGGGCAGATCGTGTTGCATCAAACGGTGACACGGCCAACAAAATCGGAACCTATAGTGTTGCCTTGTGTGCCAAGTTTCATAATGTACCTTTTTACGTGGCCGCACCCGTAACTTCAATTGATCTAGCACTTTCTTCTGGACAAGATATCGTCATCGAGGAGAGATCTCCCAAGGAATTGTTGAATGCGCGCGGAGGACTGGGAGAGCAAGTTGCCGCCTCTGGAATTTCTGTGTGGAACCCAGCTTTTGATGTCACACCGGCTAATCTAATATCCGGGGTCATCACCGAGAAGGGCGTCATTACAAAAACATCGGCGGGTGATGCTTTTGACATAAAAGCTTTCATACAGAAAACAGCTTAA 1128 0.4601 MSSDSNNGVSPTNTLQSILYNPGSLHLLDQTKLPLESVYLEIRDSTDGWNAIRDMVVRGAPAIAIAGALSLAVEVFNLDGFSGSPADAASFLQNKLEYLVSSRPTAVNLADAATKLKEVISKAAATTAEAKGVFQAYIEAAEVMLEDDVASNKAIGSYGASFIQNQTQKHKLSVLTHCNTGSLATAGYGTALGVIRALHGGGSLERAYCTETRPFNQGSRLTAFELVHEKIPATLIADSAVAALMKAGRVDAVVVGADRVASNGDTANKIGTYSVALCAKFHNVPFYVAAPVTSIDLALSSGQDIVIEERSPKELLNARGGLGEQVAASGISVWNPAFDVTPANLISGVITEKGVITKTSAGDAFDIKAFIQKTA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1515 375 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 13 372 - -
Lal4g1515 375 TIGRFAM eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 43 358 IPR011559 GO:0044249
Lal4g1515 375 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 15 367 IPR005251 -
Lal4g1515 375 Gene3D - 204 370 IPR042529 -
Lal4g1515 375 Gene3D - 13 203 IPR027363 -
Lal4g1515 375 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 13 372 - -
Lal4g1515 375 SUPERFAMILY NagB/RpiA/CoA transferase-like 13 360 IPR037171 -
Lal4g1515 375 Pfam Initiation factor 2 subunit family 57 357 IPR000649 GO:0044237
Lal4g1515 375 TIGRFAM salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 16 358 IPR005251 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1515 54 373 Eukaryotic Initiation Factors Gene Family AT2G05830 77.882 2.49e-173 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1515 K08963 - gmx:100799311 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1515 4 19309542 19312540 Lal4g1515 4 19309542 19312540 ECH