Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1510 ATGTCTACCTCATCGGAGTATTCTGAGTTTTCCGGCCAAATTCCGGTGAGGTCGCCGGAGAAAACAAGTTTCTCTCAAACTTGTAGTTTATTGAGTCAATACATAAAGGAAAAGGGTAATTTTGGAGATCTTACCCTTGGGATCACATGCAACATACAACCAATTGGGTCACTTGAGACATCTTGTCAATCTGCAACAACCATGAACTTGTTACCTACCAATGAAAATAACATGGCACCAAAGAACCTTACATCTAGTGCAATTAAGACTATGAGCAAGGGATCTAAAGCTGCACCATTAACAATCTTCTATGCTGGACAAGTTATTATATTCGATGATGTTCCGGCCGATAAAGCCAATGAGCTAATGTCCTTTGTCAGCAAAGGAATCTCCCGAACCCAGAGCCATCCAACATTTCCTCATAATTTGATCAGAACATCTGCTTGTTCGATTACTCCGGTTGTTCCTAATGTGACAATTATCCCTAGTTCGGGCATCGACTCGATTCATGAATGCTCTCAACCATCATCTAGACCTGTTGTTTGTGATTTACCAATTGCTAGGAAAGCTTCACTTCACCGGTTCCTCGCGAAGAGAAAGGATAGAATTGCTGCCAAAGCACCATATCAAATAACAAGTCACATGGGAGCTGCTAATAAGCCAGTTGAATCCATGTCTTGGATTGGCTTAAGTGCTAAATCACCTCAGATCTGA 714 0.416 MSTSSEYSEFSGQIPVRSPEKTSFSQTCSLLSQYIKEKGNFGDLTLGITCNIQPIGSLETSCQSATTMNLLPTNENNMAPKNLTSSAIKTMSKGSKAAPLTIFYAGQVIIFDDVPADKANELMSFVSKGISRTQSHPTFPHNLIRTSACSITPVVPNVTIIPSSGIDSIHECSQPSSRPVVCDLPIARKASLHRFLAKRKDRIAAKAPYQITSHMGAANKPVESMSWIGLSAKSPQI 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1510 237 MobiDBLite consensus disorder prediction 1 20 - -
Lal4g1510 237 SMART tify_2 93 128 IPR010399 -
Lal4g1510 237 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 20 231 IPR040390 -
Lal4g1510 237 ProSiteProfiles Tify domain profile. 93 128 IPR010399 -
Lal4g1510 237 Pfam tify domain 96 126 IPR010399 -
Lal4g1510 237 PANTHER PROTEIN TIFY 10A 20 231 - -
Lal4g1510 237 Pfam Jas motif 185 210 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1510 Lal-Chr4 19273028 19276359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1510 1 233 Tify Gene Family AT1G19180 39.924 5.25e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lal4g1510 tify 1.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1510 K13464 - gmx:100801449 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1510 4 19273028 19276359 Lal4g1510 4 19273028 19276359 ECH
Lal17g1483 17 16279601 16282714 Lal4g1510 4 19273028 19276359 LSH
Lal21g1182 21 14630503 14633553 Lal4g1510 4 19273028 19276359 LSH
Lal14g1638 14 16747697 16752164 Lal4g1510 4 19273028 19276359 PCT
Lal7g1044 7 16583394 16585491 Lal4g1510 4 19273028 19276359 PCT
Lal19g1186 19 15294520 15297914 Lal4g1510 4 19273028 19276359 PCT
Lal4g1510 4 19273028 19276359 Lal14g1638 14 16747697 16752164 PCT
Lal4g1510 4 19273028 19276359 Lal7g1044 7 16583394 16585491 PCT
Lal4g1510 4 19273028 19276359 Lal19g1186 19 15294520 15297914 PCT