Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1494 ATGGCACTATGCAATCGATTCAGATCGGGAATCTTCAACAAATTACAGATTCTCACTTCTCAGAGATCCAATCTTCAACGATCCCTTATTGCTCCTTCCACTTCCCTGGTCTCCAGGAATTATGCTGACTTTCCCGGCCAAAAGGAGAAGAAAGTTAAGATCCCGAAGGCTTTGTATGGGGGTTCAGGAAACTATGCCACTGCTTTGTATATTGCAGCAGTGAAAGCTAATGCAGTGGAGAAGGTGGAGTCTGAGCTTCTTGCATTTGCTGAGGCAGTAAAGAACAGTGTTGTATTTTCACAGTTTACAAAGGACCCTTCTGTTGCTAAGGATATTAGAGTAAAGGCCATCCAGGATATTTGTGGCGAAGCTAAGTTTTCCGATGTTACAAAGAACTTCCTTGTTATCGTTGCCGAGAATCTGAGGCTTAAAAACATAGACACCATTGCAAAGAGGTTTGTGGAGTTGTCAATGGCTTATAAGGGAGAAGTGAAAGCCACTGTGACCACTGTCTTTCCTCTTCCCGCTGAAGAGGAGAAGGCACTGAAGGATACTCTTCAGGAGATGTTAGGTATTGGCGCAAAGGTGCATCTTGAACAGAAGATTGATCCAAGCATCCTTGGTGGTATAGTGCTGGAATTTAGTGAGAAGGTGTTTGACATGTCTATCAAGACTAGGGCACAACAGATGGAGAGGATCCTCCGAGAGCCCGTAAATATCGGCAACATCTAG 732 0.4426 MALCNRFRSGIFNKLQILTSQRSNLQRSLIAPSTSLVSRNYADFPGQKEKKVKIPKALYGGSGNYATALYIAAVKANAVEKVESELLAFAEAVKNSVVFSQFTKDPSVAKDIRVKAIQDICGEAKFSDVTKNFLVIVAENLRLKNIDTIAKRFVELSMAYKGEVKATVTTVFPLPAEEEKALKDTLQEMLGIGAKVHLEQKIDPSILGGIVLEFSEKVFDMSIKTRAQQMERILREPVNIGNI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1494 243 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 196 215 IPR020781 GO:0015986|GO:0016020|GO:0046933
Lal4g1494 243 PANTHER ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL 27 236 - -
Lal4g1494 243 Pfam ATP synthase delta (OSCP) subunit 63 234 IPR000711 GO:0015986|GO:0046933
Lal4g1494 243 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 64 234 IPR000711 GO:0015986|GO:0046933
Lal4g1494 243 PANTHER ATP SYNTHASE DELTA CHAIN 27 236 IPR000711 GO:0015986|GO:0046933
Lal4g1494 243 Gene3D - 61 154 IPR026015 -
Lal4g1494 243 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 62 162 IPR026015 -
Lal4g1494 243 PRINTS ATP synthase delta subunit signature 61 80 IPR000711 GO:0015986|GO:0046933
Lal4g1494 243 PRINTS ATP synthase delta subunit signature 131 142 IPR000711 GO:0015986|GO:0046933
Lal4g1494 243 PRINTS ATP synthase delta subunit signature 142 156 IPR000711 GO:0015986|GO:0046933
Lal4g1494 243 PRINTS ATP synthase delta subunit signature 194 209 IPR000711 GO:0015986|GO:0046933
Lal4g1494 243 PRINTS ATP synthase delta subunit signature 209 227 IPR000711 GO:0015986|GO:0046933
Lal4g1494 243 Hamap ATP synthase subunit delta [atpD]. 57 236 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1494 Lal-Chr4 19083747 19088133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1494 86 243 Primary Pumps ATPases AT5G13450 55.696 7.69e-62 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1494 K02137 - gmx:100790990 382.489