Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1484 ATGGTGGTTTTTCTTGGCCAATGCACCACACCATTTGGTGTTTCTGGTGCACCTCCTTCTGGTTATGTTGGAGTAGAGACTCTAATGGTTTCTCCTTCTGATTTTGTTGATTCATTGGGAACAATTGTTAATGTTTTGCATAGTGTAACTACTTCTCTCTTAAATGCCACTCATAGCAATAACCATGTTCTGTCTGACTGCATTGAATTACTTGGCTTAACAAGAGATTTGCTAGATTGGTCTATATCAACCACTAAGAGTCCCAAAGGCAAGACTAACACTACTACTGGAAACTTGAGCTCTGATTTAAGAACATGGCTAAGTGCTGTACTTACAAATATCGACACATGCATGAATGAAATTGGAGGAACCAAAGACTTATTAATGGGTCAAATATTAACTAACTTAAAAAATGTAACCACATTGGTCAACAACCTTCTCTCTAAGTGCAAACATGACCAATTCCCTTCATGGGTTGAACAAGGTGACCATAATCTATTACAAATAGGTAACATTACTGTGGATATTATAGTAGCTGCTGATGGGTCAGGGAATTATATTAAAGTCATGGATGCAGTGAATGTAGCACCAGAATATAGCATAAAACGTTTTGTGGTGTTAATAAGAAAAGGGAATTACAATGAGAATATTGAAGTGGAACCTTATGATGATTGGAGAGGACATGGAGCTACTATTATAAGTGGTAACTTGTTTAAAACTCAAAATGTATCCACATATGGCACAACTACCTTTGCTGTGAATGGAAGATGGTTCATAGGAAAAGACATTACATTTATTAACACAGCAGGACCAGAAAATAACCAATCTGTTGCACTAAGATCAGACTCTGACCTCTCAGTTTTCTACAGATGTGGAATATTTAGTTACCAAGACACCCTTTATGCCCACACCATGCGCCAATTCTATAGAGAATGCACTATCAGTGGTACAATTGATTTCATATTTGGTAATGCCACTGCAGTGTTCCAAAACTGCCAAATACTTGTCAGAAAAGGCAAACCAAATCAAAGGAACACAATCACAGCACAGGGTGCAAGATTCCCAAATCAAACATCATGTTTCACATTCCAATCCTGCAATATCTCTACAGATAATGACCTTATACCCTTTCTAAATTCCACTGAAACATACCTTGGAAGACCATGGCGACCATATTCTGAAACAGTTTTCATGCAATCCTACTTTAGTGATGTGGTGAATCCAAAAGGGTGGCTAGAGTGGAATGGGACCAATAATTTGGACACATTGTACTATGCCGAGAGCTGCATAGACAATAGAGTACAATGGCCTGGGTATCATGTTTTGAAAGATCCTAGCCAGGCTAGTATGTACACAGTTGCACAATTGATTCATGGGGATCTATGGTTACCTTTAACAGGTGTAAATTTCACTTCTGGATTTGTGGTTTAA 1431 0.3809 MVVFLGQCTTPFGVSGAPPSGYVGVETLMVSPSDFVDSLGTIVNVLHSVTTSLLNATHSNNHVLSDCIELLGLTRDLLDWSISTTKSPKGKTNTTTGNLSSDLRTWLSAVLTNIDTCMNEIGGTKDLLMGQILTNLKNVTTLVNNLLSKCKHDQFPSWVEQGDHNLLQIGNITVDIIVAADGSGNYIKVMDAVNVAPEYSIKRFVVLIRKGNYNENIEVEPYDDWRGHGATIISGNLFKTQNVSTYGTTTFAVNGRWFIGKDITFINTAGPENNQSVALRSDSDLSVFYRCGIFSYQDTLYAHTMRQFYRECTISGTIDFIFGNATAVFQNCQILVRKGKPNQRNTITAQGARFPNQTSCFTFQSCNISTDNDLIPFLNSTETYLGRPWRPYSETVFMQSYFSDVVNPKGWLEWNGTNNLDTLYYAESCIDNRVQWPGYHVLKDPSQASMYTVAQLIHGDLWLPLTGVNFTSGFVV 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1484 476 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 51 147 IPR035513 -
Lal4g1484 476 SMART PMEI_2 18 149 IPR006501 GO:0004857
Lal4g1484 476 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 152 IPR035513 -
Lal4g1484 476 SUPERFAMILY Pectin lyase-like 174 473 IPR011050 -
Lal4g1484 476 Pfam Pectinesterase 175 460 IPR000070 GO:0030599|GO:0042545
Lal4g1484 476 CDD PMEI-like_4 26 147 - -
Lal4g1484 476 ProSitePatterns Pectinesterase signature 2. 314 323 IPR033131 -
Lal4g1484 476 Gene3D - 169 474 IPR012334 -
Lal4g1484 476 PANTHER PECTINESTERASE 29 154 - -
Lal4g1484 476 PANTHER PECTINESTERASE 153 474 - -
Lal4g1484 476 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 29 154 - -
Lal4g1484 476 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 153 474 - -
Lal4g1484 476 Pfam Plant invertase/pectin methylesterase inhibitor 52 147 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1484 Lal-Chr4 18958766 18961891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1484 23 475 Carbohydrate Esterase AT3G43270 47.976 1.44e-160 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1484 K01051 - gmx:100798620 522.316