Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1455 ATGGTGATTTTAAACATTGGGAGGAAGAAGGAGAAGGGAAAAGAAGGGCATAGGGTGGTGGTTGGGAGATATGAATTTGGTGAGACAATTGGAGAAGGTAATTTTGGAAAAGTGAAGTTGGCTAAGGATATTCATAATCATCAACTTTTTGCTGTTAAGATTCTTGAAAAGAGCAAGATCATTCATCTCAATAACACTGATAGGATAAAGAGGGAAATAGCAACCTTAAAGATCCTCAAGCACCCAAATGTTGTTAGATTATACGAGGTTTTGGCTAGCAAAACCAAAATTTATATGGTACTTGAGTATGTAACTGGAGGAGAGTTATTTGAAAAAATTAGATCCAAGGGTAAACTTACAGAAGCTGCAGGTAGGAAGATATTTCAACAGTTGATTGATGGTGTAAGTTATTGTCACAATAAAGGTGTCTTCCACAGGGATCTTAAGCTGGAAAATATACTTGTGGATGCCAAAGGGAACATAAAGATAACAGATTTTAATCTTAGTGCTGTACCTCAGAACTTTAGGGAAGATGGGTTATTGCATACAACATGTGGAAGTCCCAACTATGTTGCACCTGAAATTATTGCCAATAGAGGCTATGATGGTGCAACTTCAGATACATGGTCATGTGGTGTTATCTTATATGTTCTTCTAATAGGGTACCTTCCTTTTGATGACAGAAATCTTGCTGTTCTATATCAAAAGGTTTTTAAAGGAGATGTTCAGATACCTAAACGCCTATCACCTGGTGCCAAAAATATGATAAAGAAGATTCTTGATCCTAACCCTAGAACTAGGTTAACAATGGCTATGATCAAAGAAGATGAATGGTTCAAGGAGGGATATATTCAATCAATTCCAGAAGATGAGGAAGAAGATATACATAGTAATGATGAAGTCCTTTCAATCAATGAAATGCAACATGAAGCAATAAAAGGGAGTCCAAGATCATCAACACTTATCAATGCATTTCAGTTGATAGGAATGTCTTCATGTCTTGATCTCTCTGGCTTTTTTGAAAAAGAGGATGTATCTGAAAGGAAGATAAGATTTACATCCAATCATTCACCAAAAGATTTGATTGAGAGGATTGAGGGCATTGTAATAGAAATGGGACTTAGAGTCCAAAAGAAAAATGGAATGTTGAAAGTGACACAAGAAAACAAAACACAGAGAAGTCTAAGTACCCTCTCAGTGGCAGCAGAGGTGTTTGAAATAAGCACATCCTTGTATGTAGTAGAATTAAGAAAGCATTATGGAGATCCTACTATATATAGACAGTTATGCAACAAGTTATCCAATGATTTGGGTATTCACCAAAACCAAGATCTAGGGAGCTCAGAAATTATTGGCATTTGA 1362 0.3612 MVILNIGRKKEKGKEGHRVVVGRYEFGETIGEGNFGKVKLAKDIHNHQLFAVKILEKSKIIHLNNTDRIKREIATLKILKHPNVVRLYEVLASKTKIYMVLEYVTGGELFEKIRSKGKLTEAAGRKIFQQLIDGVSYCHNKGVFHRDLKLENILVDAKGNIKITDFNLSAVPQNFREDGLLHTTCGSPNYVAPEIIANRGYDGATSDTWSCGVILYVLLIGYLPFDDRNLAVLYQKVFKGDVQIPKRLSPGAKNMIKKILDPNPRTRLTMAMIKEDEWFKEGYIQSIPEDEEEDIHSNDEVLSINEMQHEAIKGSPRSSTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNHSPKDLIERIEGIVIEMGLRVQKKNGMLKVTQENKTQRSLSTLSVAAEVFEISTSLYVVELRKHYGDPTIYRQLCNKLSNDLGIHQNQDLGSSEIIGI 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1455 453 Pfam NAF domain 320 378 IPR004041 GO:0007165
Lal4g1455 453 CDD CIPK_C 323 434 - -
Lal4g1455 453 SMART serkin_6 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g1455 453 ProSiteProfiles NAF domain profile. 317 341 IPR018451 GO:0007165
Lal4g1455 453 Gene3D Transferase(Phosphotransferase) domain 1 104 285 - -
Lal4g1455 453 Gene3D Phosphorylase Kinase; domain 1 13 103 - -
Lal4g1455 453 Gene3D Kinase associated domain 1, KA1 317 439 - -
Lal4g1455 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Lal4g1455 453 Pfam Protein kinase domain 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g1455 453 SUPERFAMILY Protein kinase-like (PK-like) 20 294 IPR011009 -
Lal4g1455 453 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Lal4g1455 453 ProSiteProfiles Protein kinase domain profile. 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g1455 453 Pfam Haspin like kinase domain 93 171 - -
Lal4g1455 453 PANTHER - 13 445 - -
Lal4g1455 453 PANTHER CBL-INTERACTING PROTEIN KINASE 21 13 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1455 Lal-Chr4 18725801 18733040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1455 87 438 CBL-interacting serine-threonine protein kinases AT3G17510 68.839 3.31e-170 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lal4g1455 Pkinase 3.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1455 K07198 - gmx:100815660 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1454 17 15923629 15932121 Lal4g1455 4 18725801 18733040 LSH
Lal14g1610 14 16551489 16556892 Lal4g1455 4 18725801 18733040 PCT
Lal7g1009 7 16309823 16315146 Lal4g1455 4 18725801 18733040 PCT
Lal19g1157 19 15089175 15094721 Lal4g1455 4 18725801 18733040 PCT
Lal4g1455 4 18725801 18733040 Lal14g1610 14 16551489 16556892 PCT
Lal4g1455 4 18725801 18733040 Lal7g1009 7 16309823 16315146 PCT
Lal4g1455 4 18725801 18733040 Lal19g1157 19 15089175 15094721 PCT