Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1439 ATGGAGGAAGTTGACCTAGAAGGTGGTGGAGAAAACGGTTTTCGTGTTCGCAAGTATCTTCCTGTGTTAGCAAACGATCGTGCGGTTCATGAAATTTCTCCAATCGATTCTGGATCTACTGCTTCATCTGCTTCTGCATTTCCAGATCAATCTCCTAATATCAGAAAAATAAATGTAGGTCCGGGTGTGAATGGGAGTTCTGATGCCAAAGAAAGGAATGCTCCTCATCAACAACAGCCTAATGGAACCGAACAAGAATCCAAACTAGAATTATTTGGTTTCGATTCCCTCGTCAGCATTCTTGGTCTCAAAAGCATGACTGGTGAGCACGTTGCACCACCTTCTAGTCCTAGAGATGGTGAAGATATTCCTATAATTGCTGGGCAGCCTGATAAAATGGGTACAATGATGGGTGTATTCATTCCTTGTGTACAGAGCATTTTGGGCATCATCTACTACATTCGTTTCTCTTGGATTGTTGGTATGGCTGGCATAGGAGGGTCATTGTTGGTTGTTGCTTTATGTGGCATTTGTACTTTCCTTACTTCAATATCATTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGGCCATACTATCTCATTGGTCGAGCCCTTGGTCCAGAAGTTGGAGTTAGTATTGGTTTATGCTTCTTCCTTGGAAATGCAGTTGCTGGAGCACTTTACATATTGGGAGCCGTGGAAACATTTTTGAAAGCAGTTCCTGCCGCTGAGATTTTTAAAGGGACTGTAACAGCAGTTAATGGAACTGCAGTTGCGCAACCAATACAGAGTCCAAGCTCTCATGATCTGCAAATTTACGGGATTGTTGTGACTATACTTTTATGCCTTATTGTATTTGGAGGAGTAAGGATGATAAATCGAGTTGCACCTGCTTTTCTAATACCTGTTTTATTCTCATTGATCTGCATATTTCTGGGGGTATTTTTGGCTAGAAAGGATCATCCCGCAGAGGGAATTACTGGGTTGAGTTTGGAGACAATTAAAGAAAATTGGAGTTCCGATTATCAAAAAACTAATAGTGCTGGAATTCCTGAAACTGATGGCTCCGTAACCTGGGATTTCAATTCATTGGTAGGCCTTTTTTTCCCGGCTGTGACAGGAATAATGGCCGGTTCTAATCGATCATCCTGCCTGAAAGATACTCAGCGATCGATTCCTGTTGGAACATTAGCTGCTACTCTTGTAACTTCAGCTATGTATCTTGTTTCTGTGATTTTGTTTGGTGCTGTTGCCAGCAGAGAGAAGCTTTTAACAGACAGGCTACTTACAGCTACGATAGCCTGGCCTTTTCCGTCGTTAATTAAAATTGGAATTATTCTTTCAACTATGGGTGCTGCTCTTCAGAGCCTCACTGGTGCCCCAAGTCTTCTTGCTGCAATAGCCAATGATGATATTTTACCTATTCTGAACTATTTTAAAACTACAGGTAGCAGTGAGCCCCATGCTGCTACCCTTTTCACCGCTTTTCTCTGTGCTGGGTGTGTCGTTATTGGGAATATGGATCTTATCACTCCAACTGTAACTATGTTTTTCCTTCTATGTTATGCTGGTGTCAACTTATCCTGCTTCCTTCTCGATCTTCTCGATGCCCCGAGTTGGCGTCCTCGTTGGAAATTTCACCATTGGAGTCTGTCTCTTCTAGGAGCATTACTTTGCATAGTGATCATGTTCCTGATTTCTTGGTCATTCACGGTCGTGGCTTTGGCCCTTGCAAGCCTTATATATAAGTACGTGAGCATCAAAGGAAAGGCTGGGGACTGGGGAGATGGTTTCAAAAGTGCTTATTTCCAACTAGCACTTCGTAGCCTTCGTTCACTAGGAGCAAACCAAGTGCACCCAAAGAATTGGTACCCAATTCCACTAGTATTTTGCCGACCCTGGGGTAAACTGCCAGAAAATGTTCCCTGCCATCCCAAACTTGCGGACTTCGCTAACTGTATGAAGAAGAAAGGTCGAGGAATGTCCATATTTTTCTCTATATTGGATGGGGACTATCATGAACGTGCTGAAGATGCTAGGGCTGCTTGTAAACAACTCAGTACTTACATTGATTACAAGAATTGTGAAGGTGTGGCTGAGATTGTTGTAGCCCCTAATATGTCTGTAGGCTTCCGAGGCATCATTCAGACAATGGGCCTTGGCAATCTCAAGCCAAACATTGTGGTGATGCGTTACCCAGAAATCTGGCGTCGGGAGAACTTAACAGAAATCCCTTCCACCTTTGTCGGGATAATAAATGACTGCATTGTTGCAAGCAAGGCAATAGTTATAGTGAAGGGTCTTGATGAATGGCCTAACGAATACCAGAAACAGCATGGAACTATTGATTTATATTGGATTGTTAGAGATGGTGGTCTCATGCTGCTTCTCTCTCAACTACTTCTTACCAAGGACAGCTTCGAGAATTGCAAGATTCAGGTATTCTGTATTGCAGAAGATGATGCAGATGCAGAGGCACTGAAAACAGATGTGAAAAAATTCCTTTATGATCTTCGAATGCATGCAGAAGTCTTTGTCATAACCATGAAATGGGATGCACAAACGGGTGGTGATTCTCCGCAAGACGAGTCATTGGAAGCATTTGCCAGTGCTCAACAAAGAATTGATGATTATTTAACCGGAATGAAAGCTTCAGCAGAGAGAGACGCTACCCCTCTAATGTCGGATGGTAAGGCTGTGGTTGTGAACGAGAAGCAGGTTGAAAAGTTTCTTTACACAACACTTAAGCTCAATTCGACAATTTTAAGATACTCGAGAATGGCGGCCGTAGTACTGGTAAGTCTTCCTCCACCTCCACTCAACCACCCATCATATTTCTATATGGAGTATATGGATCTGTTGCTGGAGAATGTACCAAGGATTTTACTTGTAAGAGGGTACCACAGAGATGTTGTAACTCTATTTACTTAG 2940 0.4289 MEEVDLEGGGENGFRVRKYLPVLANDRAVHEISPIDSGSTASSASAFPDQSPNIRKINVGPGVNGSSDAKERNAPHQQQPNGTEQESKLELFGFDSLVSILGLKSMTGEHVAPPSSPRDGEDIPIIAGQPDKMGTMMGVFIPCVQSILGIIYYIRFSWIVGMAGIGGSLLVVALCGICTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYILGAVETFLKAVPAAEIFKGTVTAVNGTAVAQPIQSPSSHDLQIYGIVVTILLCLIVFGGVRMINRVAPAFLIPVLFSLICIFLGVFLARKDHPAEGITGLSLETIKENWSSDYQKTNSAGIPETDGSVTWDFNSLVGLFFPAVTGIMAGSNRSSCLKDTQRSIPVGTLAATLVTSAMYLVSVILFGAVASREKLLTDRLLTATIAWPFPSLIKIGIILSTMGAALQSLTGAPSLLAAIANDDILPILNYFKTTGSSEPHAATLFTAFLCAGCVVIGNMDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWKFHHWSLSLLGALLCIVIMFLISWSFTVVALALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLVFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFFSILDGDYHERAEDARAACKQLSTYIDYKNCEGVAEIVVAPNMSVGFRGIIQTMGLGNLKPNIVVMRYPEIWRRENLTEIPSTFVGIINDCIVASKAIVIVKGLDEWPNEYQKQHGTIDLYWIVRDGGLMLLLSQLLLTKDSFENCKIQVFCIAEDDADAEALKTDVKKFLYDLRMHAEVFVITMKWDAQTGGDSPQDESLEAFASAQQRIDDYLTGMKASAERDATPLMSDGKAVVVNEKQVEKFLYTTLKLNSTILRYSRMAAVVLVSLPPPPLNHPSYFYMEYMDLLLENVPRILLVRGYHRDVVTLFT 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1439 979 MobiDBLite consensus disorder prediction 70 86 - -
Lal4g1439 979 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 11 978 IPR004842 GO:0006811|GO:0015377|GO:0016021
Lal4g1439 979 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 11 978 - -
Lal4g1439 979 Pfam Solute carrier family 12 779 978 IPR018491 GO:0006811|GO:0016020|GO:0022857
Lal4g1439 979 Pfam Solute carrier family 12 648 769 IPR018491 GO:0006811|GO:0016020|GO:0022857
Lal4g1439 979 Gene3D Amino acid/polyamine transporter I 131 596 - -
Lal4g1439 979 MobiDBLite consensus disorder prediction 33 86 - -
Lal4g1439 979 TIGRFAM 2a30: K-Cl cotransporter 72 979 IPR004842 GO:0006811|GO:0015377|GO:0016021
Lal4g1439 979 Pfam Amino acid permease 138 614 IPR004841 GO:0016020|GO:0055085
Lal4g1439 979 MobiDBLite consensus disorder prediction 35 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1439 Lal-Chr4 18566961 18580556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1439 133 979 Inorganic Solute Cotransporters AT1G30450 82.075 0.0 1434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1439 K14427 - gmx:100795205 1676.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g1425 17 15695003 15718266 Lal4g1439 4 18566961 18580556 LSH