Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1385 ATGGCGTTTGATCAAAATTTGGTTCCCAACGTCACTCGAACCATAGCCGGAGAGTCACTCATTCGAACCGGGGAGTGTTACTCTTCAAATTCGGTTCAAACCGGAGAGTATTGTTACACTCCAAATTCGGTTCGAACCGGAGAGTGTTGTTACACTCCAAATTCGGTTCGAACCGATTCGGTGCAACTTTACTACCCTGCATCTGTTTCTGATGCTGCTTTGGTTGGAATGGGGTACGGAAATGTGGCTTCTTCCATTGGTACTTGGTGTGTTGGACCTGCTGTTGGGTTTAATTATGGTCACAATTATCCCTATCCAATTGCTGGTGGCAAGGGTGTTATTGATGGTTCGGGTGGTGCCATGGCGAGTGTACATGGATATCCGATGAATTTGGTCAATCGGGTTGTGGGAAATGGCTTGAATAATGCTCTCCAGGGTAAGGAAAAAGTGATTAGCAATAATGCTAGTGATCAGGTTGGTGGTGTTGTGTCAACAAAGGTTGATCATCAGGTTAGTGGTGAATGTGGGGATAATTCAGTTTCGGTGAAAACATTGAAGTTGATGTGTAGTTATGGTGGGAAGATTTTGCCTAGGCCCAGCGACGGAATGTTGAGATATGTTGGAGGGCAAACTAGAATCATAAGTGTAAAAAGGAATGTAAGCTTCAGTGATCTGATGCAAAAGATGGCTGATACTTATGGTCAGCTTGCGGTTATCAAGTATCAGCTCCCGGATGAGGAACTTGATGCATTGGTTTCGGTTTCATGCACCGACGATCTTGAGAATATGGTGGAGGAGTATGAAAGGTTAATTGACAGCTCTCCCGATGGTTCAGCTAAATTAAGGTTGTTTCTTATTTCTGCTTCAGAACTTGATCCTTCTGCGGTGATTCAGTTTGGTGACTTTCTAGATAGTGGGCAGAAATATGTTGAAGCTGTGAATGGATTTACAGATGGAATTAGTGGTAAACTCGCGATAAAACAAAATTCTACGAGTGCAGCATTGATGCAAAATTCTGACTTGAGTGGTATAGAGGCTCTTGATTGGTCAAATGCTGGTCAAGGAGATGTTAGTGGGGCACCTAAGTATGATGTTTTAGCACCTAACGGCAATGTGGCTGTTTCTCATGATACTGCAGCAAATTTGGTGGTTTCGGAGCCCTGTGCATTGATTTACTCAGATAGTTCTGCGGCGACTAATTCTGGTCCTACAAAAACTTCACCTTTCCAAAACGAGGTTGAGTTAGAAAGTTCTTTACCTGTTACGTTATCCCAGCAGCAGTTTGGATTGCTTGAACATGGAATGGAAATTCCACTTCCTGCACCTTATTTGCAGCCTTTTGTCGATCCTTGTCAAGAAGTTATGAATCATGCAGACAATGTCAAGCTGCATCCCCAGATGGGCTTCCCAAATCCTCAGCTTTTAGGTCAGCCTGGGTCTTTCTACTCCCAACATCCGTTTCATGATAACACTGCTGGTTTAGTGTCTCATCAGGCAATCCCTGCAGTGCAAATGATGACCAGGCCATCTTCTCATGTTGGTGTAAGACAAAATATGATTCAACCACAGCTACTGATGCAACCGCAGCAAAATCGTTTGGACCAATATAGTGATGAAAATAAATCCGGGGTAAGGATTATCCAGCTTCCGGCTGAACAAAGCTATAATGCATACCCAGTTCAACTCCCTTATGTTATGGTTGGAGGTAATTTTCACTGGGTTCAGGTTCCACCACCAGAGCATGTTGTTTTCACCGATGCATTATTACCTCAACAACTGACAATGATCTCTGAGAAAGTCCAAAGAGTGGAGGAGTGTTATATGTGCCAGAAAAAACTTCCTCATTCACATTCAGATCCAGTAATTCAGGATCAGCATAAAAGTTTTGCAAGTCCTATTCCTGATTCAATTCCAAGTTACAATAGTCTCCCTGTGGAGGAAAATTTAAAAGCTCAAGCAACAAATAGGATTTTGGTAACTGCACCATTGAAGGAAAGCAATGCTGAACTAGTGGTTGAGACCAGACCCATGGTCATCAGCAAATTGGAACCACCGGGTGGAGTACCTTGTTCTGATGCAACCACACTAAGTCATAATCTTGATCTGGAGCCTGAAGGTGAGAAGAATTTTATACAAAGGTCGGATGGTTTTGATCATTCCAGGAATGCAATTATCCAAGAAGCAATTGGAAGAACAAGTGAAAAACAGTCACCAAGTGATGGTCTCACAAGAACAGCACCGCTGTCTTATCTTGGTGATGTCATTCACCAGCATGTGGTGCCAGTTGAAAACTGCATTAAAGAGGATGTGCTTGTCAATAAAATAGTTACTAATGATATACCTTTAGTTGGTGTCTCCTCTATTGAAGCTTCTCAGTGTATGGTTCAAGAATCTCCACATGAATATACTAATGAACTGACTAGCATTGTTTCAAAAGCAGATGCTAAGGGGAATTGGACCACACAGGACCATCTCAAATCTATTGATGGAAGAGTGGACATCCTCAACATAGGTAATCCTGAAATTCATGTAAATAATAATGATTTTGATTACAACACTCAGCATGCTGTAGAGGAGAAAGGGGTGGTTCTGGATAACAACCTTGACAGGTCTGTATTGATTGTTGATGCAAATCAAATTCAGCTGATGGATGTGTTTCCTAGTTCTACTATGGAATTTTCAACTATAAATAATTGCAGGCCAGTTGATTATAATGAGGTTGTACACCCCCCTTGGGGTGTTCCCGGATCAAATCCTCAATTGAAGAGTGGAAACCATCACCAGAATGATGCAATTTCTTCTTCTTCACCATCTGTCAGGCTTGGAAATGTGCAGGGTTCTTCAAACTCACTTTTTAGCAATCAGGATCCCTGGCATCTACATGGAACCTACTTTCCACCACCCAGGCCTAAAAAAATTGCATTGAAGAAAGAAACCTCTTCCCATAAGAATCAGTTTGGTGAGAATCCTGACAATAGCCTGGAACAAAATTTAGAATCTCAGTTGGATGATGGCCTTTACCATACACTCAAACATAATTTAACTTTAGAAGATGCTCAATCTGCTAAGGGTTCATTAGAAGACCGACAGAACCAACAGCTTCAAGCTGTTGCTGAAGGTGTAGCTGCTTCCGTTCTGCACTCAAGCACTCCTTCAAATCCTGACTTGCATGCCAGAGATGTGCCCCATCATGAAGACATGGAAAATATAGATGCTCAAAATGATCTAATAGATATACAGTGTACTGATAAAACTCAGGATGTCAAGAGAAAGCTGCCAGAGAAGGCAAATCTCAGCTTTCCGGAATCACATATTGGATCATTGCAGGTTATAAAGAATTCTGACCTTGAAGAGCTTATCCAATTGGGTTCTGGGACCTTTGGTACTGTATATCATGGAAAATGGAGGGGTACTGATATTGCAATTAAGCGGATTAATAATAGGTGTTTTTCTGGAAAGCCTTCAGAGCAAGATTGCTTGAGAGATGATTTTTGGAATGAGGCAGTCAAGCTTGCTGACTTGCACCATCCAAATGTGGTAGCTTTCTATGGTGTTGTGCTTGATGGCCCAGGAGGTTCTGTGGCAACAGTAACAGAGTATATGGTTAATGGTTCTCTAAGAAATGCCTTGCAGAAGAATGGGAGGAATCTTGACAAGCGCAAGCGTCTTTTGATTGCAATGGATGCAGCATTTGGTATGGAGTACCTGCATGGCAAAAACATAGTACATTTTGACTTGAAAAGTGATAACTTGCTGGTGAATCTCCGAGATCCACACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTATCTAAAGTGAAATGTCAGACACTGATATCTGGTGGTGTGAGAGGGACTCTGCCTTGGATGGCCCCCGAACTGCTGAACGGAAGTAGTAGCCTTGTTTCAGACAAGGTTGATGTGTTTTCATTTGGTATCGTCATGTGGGAAATCCTCACTGGAGAAGAGCCATATGCTGATTTGCATTATGGGGCTATCATAGGTGGTATTGTGAGTAACACTTTGCGGCCTCCAGTTCCAAAATCTTGTGATCCCGAATGGAGATCGCTAATGGAGAGGTGCTGGTCATCAGAGCCATCAGAAAGACCAACTTTCACAGAGATTGCGAATGAATTACGTTCCATGTCATCCAAGATCTCTCCCAAATGTCAAAATCAACAGCAGCAACCTGCTTCATCGCAGAGCCAAGTGCAGAAATGA 4221 0.4253 MAFDQNLVPNVTRTIAGESLIRTGECYSSNSVQTGEYCYTPNSVRTGECCYTPNSVRTDSVQLYYPASVSDAALVGMGYGNVASSIGTWCVGPAVGFNYGHNYPYPIAGGKGVIDGSGGAMASVHGYPMNLVNRVVGNGLNNALQGKEKVISNNASDQVGGVVSTKVDHQVSGECGDNSVSVKTLKLMCSYGGKILPRPSDGMLRYVGGQTRIISVKRNVSFSDLMQKMADTYGQLAVIKYQLPDEELDALVSVSCTDDLENMVEEYERLIDSSPDGSAKLRLFLISASELDPSAVIQFGDFLDSGQKYVEAVNGFTDGISGKLAIKQNSTSAALMQNSDLSGIEALDWSNAGQGDVSGAPKYDVLAPNGNVAVSHDTAANLVVSEPCALIYSDSSAATNSGPTKTSPFQNEVELESSLPVTLSQQQFGLLEHGMEIPLPAPYLQPFVDPCQEVMNHADNVKLHPQMGFPNPQLLGQPGSFYSQHPFHDNTAGLVSHQAIPAVQMMTRPSSHVGVRQNMIQPQLLMQPQQNRLDQYSDENKSGVRIIQLPAEQSYNAYPVQLPYVMVGGNFHWVQVPPPEHVVFTDALLPQQLTMISEKVQRVEECYMCQKKLPHSHSDPVIQDQHKSFASPIPDSIPSYNSLPVEENLKAQATNRILVTAPLKESNAELVVETRPMVISKLEPPGGVPCSDATTLSHNLDLEPEGEKNFIQRSDGFDHSRNAIIQEAIGRTSEKQSPSDGLTRTAPLSYLGDVIHQHVVPVENCIKEDVLVNKIVTNDIPLVGVSSIEASQCMVQESPHEYTNELTSIVSKADAKGNWTTQDHLKSIDGRVDILNIGNPEIHVNNNDFDYNTQHAVEEKGVVLDNNLDRSVLIVDANQIQLMDVFPSSTMEFSTINNCRPVDYNEVVHPPWGVPGSNPQLKSGNHHQNDAISSSSPSVRLGNVQGSSNSLFSNQDPWHLHGTYFPPPRPKKIALKKETSSHKNQFGENPDNSLEQNLESQLDDGLYHTLKHNLTLEDAQSAKGSLEDRQNQQLQAVAEGVAASVLHSSTPSNPDLHARDVPHHEDMENIDAQNDLIDIQCTDKTQDVKRKLPEKANLSFPESHIGSLQVIKNSDLEELIQLGSGTFGTVYHGKWRGTDIAIKRINNRCFSGKPSEQDCLRDDFWNEAVKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKNGRNLDKRKRLLIAMDAAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSDKVDVFSFGIVMWEILTGEEPYADLHYGAIIGGIVSNTLRPPVPKSCDPEWRSLMERCWSSEPSERPTFTEIANELRSMSSKISPKCQNQQQQPASSQSQVQK 1406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1385 1406 Gene3D Transferase(Phosphotransferase) domain 1 1204 1406 - -
Lal4g1385 1406 ProSiteProfiles Protein kinase domain profile. 1116 1386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g1385 1406 MobiDBLite consensus disorder prediction 977 996 - -
Lal4g1385 1406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1241 1253 IPR008271 GO:0004672|GO:0006468
Lal4g1385 1406 PRINTS Tyrosine kinase catalytic domain signature 1198 1211 IPR001245 GO:0004672|GO:0006468
Lal4g1385 1406 PRINTS Tyrosine kinase catalytic domain signature 1235 1253 IPR001245 GO:0004672|GO:0006468
Lal4g1385 1406 PRINTS Tyrosine kinase catalytic domain signature 1306 1328 IPR001245 GO:0004672|GO:0006468
Lal4g1385 1406 PRINTS Tyrosine kinase catalytic domain signature 1350 1372 IPR001245 GO:0004672|GO:0006468
Lal4g1385 1406 SMART serkin_6 1116 1387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g1385 1406 CDD STKc_MAP3K-like 1122 1379 - -
Lal4g1385 1406 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 922 1386 - -
Lal4g1385 1406 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 158 879 - -
Lal4g1385 1406 MobiDBLite consensus disorder prediction 1382 1406 - -
Lal4g1385 1406 MobiDBLite consensus disorder prediction 918 955 - -
Lal4g1385 1406 SMART PB1_new 199 288 IPR000270 GO:0005515
Lal4g1385 1406 ProSitePatterns Protein kinases ATP-binding region signature. 1122 1143 IPR017441 GO:0005524
Lal4g1385 1406 Pfam Protein tyrosine and serine/threonine kinase 1121 1379 IPR001245 GO:0004672|GO:0006468
Lal4g1385 1406 SUPERFAMILY CAD & PB1 domains 200 290 - -
Lal4g1385 1406 MobiDBLite consensus disorder prediction 910 955 - -
Lal4g1385 1406 CDD PB1_UP2 188 286 - -
Lal4g1385 1406 Gene3D Phosphorylase Kinase; domain 1 1109 1203 - -
Lal4g1385 1406 Pfam PB1 domain 204 285 IPR000270 GO:0005515
Lal4g1385 1406 SUPERFAMILY Protein kinase-like (PK-like) 1103 1378 IPR011009 -
Lal4g1385 1406 PANTHER SERINE-THREONINE PROTEIN KINASE 922 1386 - -
Lal4g1385 1406 PANTHER SERINE-THREONINE PROTEIN KINASE 158 879 - -
Lal4g1385 1406 Gene3D - 205 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1385 Lal-Chr4 18085641 18098974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1385 122 657 MAP Kinase Kinase Kinase AT3G46920 35.596 8.04e-77 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lal4g1385 PK_Tyr_Ser-Thr 1.2e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1385 - - gmx:100776264 1772.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1385 4 18085641 18098974 Lal4g1385 4 18085641 18098974 ECH
Lal21g1133 21 13875267 13883255 Lal4g1385 4 18085641 18098974 LSH
Lal14g1729 14 17318346 17324936 Lal4g1385 4 18085641 18098974 PCT
Lal7g1132 7 17214503 17220770 Lal4g1385 4 18085641 18098974 PCT
Lal19g1275 19 15885030 15890702 Lal4g1385 4 18085641 18098974 PCT
Lal4g1385 4 18085641 18098974 Lal14g1729 14 17318346 17324936 PCT
Lal4g1385 4 18085641 18098974 Lal7g1132 7 17214503 17220770 PCT
Lal4g1385 4 18085641 18098974 Lal19g1275 19 15885030 15890702 PCT