Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1373 ATGGAGATATTCAAATGCTTTTACTTCAATCTTCTAGCTACCACCTTCATGTTCACAACAGTTTTAGCAATAGACCCTTATTCAGAGGCACTCCTGAGCTTAAAATCTGAACTTGTAGATGATGATGACACTTTGCATGATTGGGTTGTGCCCATTGGAGGGAACTTAACTGAGAAATCCTATGCATGTTCTTGGTCTGGTATCAAGTGTAACAAGGACTCAACCATTGTAACTGCCATAGACCTATCTATGAAGAAACTTAGGGGTGTTATGTTAGGGAAGCATTTCAGTATCTTCACAAAGCTCTCTAATCTTAACCTGAGCTACAACTTTTTCTCTGGGCAGCTTCCATTGGAGATTTTTAATCTCACCAGCTTACAAAACTTTGATCTCAGCAGAAACAACTTTTCTGGTCACTTCCCAAGTGGAATTTCTAGGCTCCAAAATTTGGTTGTGTTTGATGCCTTAAGCAATAGCTTTTCAGGGCCATTGCCTGCTGAATTTTCACAGCTAGAATATCTCAAGGTTCTTAATCTAGCAGGGAGTTACTTTAAAGGACCAATTCCATCAGAATATGGTTCTTTCAGAAGCCTTGAGTTTCTTCATCTTGCAGGAAATTTTCTCTCTGGAAATATACCTCCAGAACTGGGCAACCTCAAAACAATGATCCACATGGAGATTGGCTACAATTTTTTCCAAAGTTCTATTCCATTCCAAATTGGTAACATGAGCAAGCTTCAGTATCTTGACATAGCAGGTGCAAATCTATCAGGGCCAATACCAAAGCAACTCTCCAATCTCACCAATTTGCAATCACTTTACCTGTTCAGAAACAACCTAAAAGGATCAATACCAAGTGAATTCAGCAAAATCAAAGCCCTTATAGATTTAGATCTCTCTGACAACCTCCTTTCAGGGTCAATTCCTGAAAGCTTTTCAGAGTTAAAGAACCTAAGACTGCTCAGTCTCATGTACAATGACATGGGTGGTAGTGTTCCTGAAGCCATTGCAGAACTCCCATCCTTGGAAACTCTTCTCATTTGGAATAATCGTTTCTCGGGATCACTTCCACAGAGCTTAGGCAGGAACTCCAAACTCAAGTGGGTGGATGTCTGCATGAACAATTTCACTGGCAGCATACCGCGAGACATTTGTGTGAGTGGTGTACTATTTAAGCTAATCCTGTTCTCAAACAAATTTTCAGGTGATATTTACGCATTGTCCAATTGTTCTTCACTTGTTCGACTTCGCTTAGAAGATAATTCTTTCTCAGGAGAGATCCCTTTAAAATTCAGCCATCTTCCTGATCTCTCATATGTTGACCTGTCTATGAACAATTTTGTTGGTGGCATTCCATTAGATATATCTCATGCTATTCAACTTGAGTATTTCAATGTCTCTTATAATCCACAATTAGGAGGCGTCATCCCTCGACAAATATGGTCTTTGCCCCGACTTCACAAAATTTCAGCATCTTCTTGTGGTATTTTAGGAAACCTTTCCTCATTTGAGCCCTGCAAATCAATTTCAGCTATTGAACTAGATAGGAACAAATTATCTGGAACTATCCCAAACAGTGTTTCCAATTGCCAAGCTCTAAAGCAGATGAAACTATCCAACAATAATCTGACAGGTCATGTACCCGAGGAGCTAGCAAGCATACCGGTTCTTGGTGTATTAGACCTATCAAATAATAAGTTCAATGGCCCTATACCTGCAAAGTTTGGTAGTTCTTCAAGTTTACAACTTCTTAATGTGTCTTTCAACTATATCTCTGGTTCAATACCCACAGGGAAGTCCTTCAAATTAATGGATAGCAGTGCATTTGTAGGAAACTCAGAGCTATGTGGAGCACCCCTTCGACCATGTTCTGATTCAGTTAAAATATTGGGAGGCAAAGGTGCATGGAGACTTACACGTATCGTGCTACTCTCTGTAGGGTTGCTAATAATCCTTCTAGGATTAGCTTTCGCAATACGTTATTTCAGAAGGGGAGTTAATAGCCAATGGAAGATGGTATCATTTTCCGGACTCCCTCAATTCACAGCAAATGATGTTTTGACAAGCTTCAGTGCCACAAAAATCACAGAAGTTCCATCACCATCACCTTTAATTTCGAAAGCAGTTCTGCCTACAGGAATAACAGTTTTAGTTAAGAAGATCGAATGGGAAGCAAGGAGCATTAAGGTGGTGTCAGAATTTGTGATGCAACTAGGAAATACAAGGCACAATAACTTAATCAGGCTTTTGGGGTTTTGCTTTAACCAGCATCAAGCGTATCTTTTGTATGATTACTTGCCCAATGGAAATTTGGCTGAGAAAATTGGAATGAAATGGGATTGGGCAGCTAAATTCAGAACTGTGGTTGGAATTGCAAAGGGACTTTGCTTCCTTCACCATCACTGTTTCCCAGCCATACCCCATGGAGACTTGAAGTCAAGCAACATTGTATTTGATGAAAACATGGAACCCCATTTGGCCGAATTCGGGTTCAAACATGTGCTGAATTTGAGCAAAGGCTTTTCTCTAACCTCAACTAAGTGGGAAAAAGAAACAGAACACAATGAAGCTATGAAAGAGGAACTCTGCATGGATGTCTATAAATTCGGGGAGATGATTCTGGAAATTTTAACTAGCAGAAGGTTGACAAATGCAGCAGCCAGCATTCACAGCAAGCCATGGGAAGTTCTTCTAAGAGAAACTTACAATGAGAATGAAGTGAGTTCTGACAGTTCATTACAAGAGATTAAACTAGCCCTTGAGGTTGCTAAGCTTTGCACTAGAAGCAGGTCATCCGACCGGCCATCGATGGAAGAGGCTTTGAAGCTTTTATCAGGATTAAAACCTCTAAAAGATGACAGAACTCAAGAAGGATACTAA 2880 0.401 MEIFKCFYFNLLATTFMFTTVLAIDPYSEALLSLKSELVDDDDTLHDWVVPIGGNLTEKSYACSWSGIKCNKDSTIVTAIDLSMKKLRGVMLGKHFSIFTKLSNLNLSYNFFSGQLPLEIFNLTSLQNFDLSRNNFSGHFPSGISRLQNLVVFDALSNSFSGPLPAEFSQLEYLKVLNLAGSYFKGPIPSEYGSFRSLEFLHLAGNFLSGNIPPELGNLKTMIHMEIGYNFFQSSIPFQIGNMSKLQYLDIAGANLSGPIPKQLSNLTNLQSLYLFRNNLKGSIPSEFSKIKALIDLDLSDNLLSGSIPESFSELKNLRLLSLMYNDMGGSVPEAIAELPSLETLLIWNNRFSGSLPQSLGRNSKLKWVDVCMNNFTGSIPRDICVSGVLFKLILFSNKFSGDIYALSNCSSLVRLRLEDNSFSGEIPLKFSHLPDLSYVDLSMNNFVGGIPLDISHAIQLEYFNVSYNPQLGGVIPRQIWSLPRLHKISASSCGILGNLSSFEPCKSISAIELDRNKLSGTIPNSVSNCQALKQMKLSNNNLTGHVPEELASIPVLGVLDLSNNKFNGPIPAKFGSSSSLQLLNVSFNYISGSIPTGKSFKLMDSSAFVGNSELCGAPLRPCSDSVKILGGKGAWRLTRIVLLSVGLLIILLGLAFAIRYFRRGVNSQWKMVSFSGLPQFTANDVLTSFSATKITEVPSPSPLISKAVLPTGITVLVKKIEWEARSIKVVSEFVMQLGNTRHNNLIRLLGFCFNQHQAYLLYDYLPNGNLAEKIGMKWDWAAKFRTVVGIAKGLCFLHHHCFPAIPHGDLKSSNIVFDENMEPHLAEFGFKHVLNLSKGFSLTSTKWEKETEHNEAMKEELCMDVYKFGEMILEILTSRRLTNAAASIHSKPWEVLLRETYNENEVSSDSSLQEIKLALEVAKLCTRSRSSDRPSMEEALKLLSGLKPLKDDRTQEGY 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1373 959 Gene3D Transferase(Phosphotransferase) domain 1 764 957 - -
Lal4g1373 959 Gene3D Phosphorylase Kinase; domain 1 691 763 - -
Lal4g1373 959 ProSiteProfiles Protein kinase domain profile. 681 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g1373 959 Gene3D Ribonuclease Inhibitor 225 469 IPR032675 -
Lal4g1373 959 PANTHER UNNAMED PRODUCT 1 950 - -
Lal4g1373 959 SMART serkin_6 681 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g1373 959 SUPERFAMILY RNI-like 80 402 - -
Lal4g1373 959 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 1 950 - -
Lal4g1373 959 Gene3D Ribonuclease Inhibitor 26 147 IPR032675 -
Lal4g1373 959 Gene3D Ribonuclease Inhibitor 148 224 IPR032675 -
Lal4g1373 959 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Lal4g1373 959 SMART LRR_typ_2 339 363 IPR003591 -
Lal4g1373 959 SMART LRR_typ_2 195 219 IPR003591 -
Lal4g1373 959 SMART LRR_typ_2 267 290 IPR003591 -
Lal4g1373 959 SMART LRR_typ_2 123 147 IPR003591 -
Lal4g1373 959 SUPERFAMILY L domain-like 390 623 - -
Lal4g1373 959 Pfam Leucine rich repeat 278 327 IPR001611 GO:0005515
Lal4g1373 959 Pfam Leucine rich repeat 511 567 IPR001611 GO:0005515
Lal4g1373 959 SUPERFAMILY Protein kinase-like (PK-like) 706 944 IPR011009 -
Lal4g1373 959 Pfam Protein kinase domain 715 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal4g1373 959 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Lal4g1373 959 Gene3D Ribonuclease Inhibitor 470 629 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1373 Lal-Chr4 17987505 17991577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1373 6 945 Receptor kinase-like Gene Family AT5G51350 52.725 0.0 933
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal4g1373 Pkinase 1.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1373 - - aprc:113852384 1520.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1373 4 17987505 17991577 Lal4g1373 4 17987505 17991577 ECH