Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1364 ATGTCCATGCAGCGTAAACAATGTTCTTGGAATGTTCCTAATGGCCTTCTCCAAATCTCTCATAGAGTTTATGTTTTTGATAGCTGTTTAACATTGGAATATGATTGGAGTAAAGATCAATACAAAGAATATACAAATAGGATAGTTGGTCAATTTCTAGAGAATGTGCAAGATGCTTCCATTATGGTATGCAATTTTCATGAGGAAGATGCCAAATTAAGGACAACCAACAACTTTTGTAAGCATAATGTTACTGTTATGGACTACCCTGGCCAATACCAACGTTGGCCAGTGCCTAAAATGGAGGTCATATGCGAATTCTTAAAGTCGTGTGGAAATTGGCTCTCGCACGGGGAACAAAATGTGTTGTTAATGCATTGTGATCGTGGCGGTGGTTGGCATGTTTTGGCGTTCATGTTGGCTGCATTGCTGATTTTCCGGAAGCAATGTAACGGAGAGGAGATGGCTTTGGATATGGTTTACAAGCAGGCTCCGCGCGAGATTTTGCACTTGATGATGCCATTGGATCCAATCTCTTCACAATTGAGGTATCTAGAGTATGTTTCCAAGTGGAATGTAGCCTTAGATTGGCCTGAATTGGACAGGGCACTAAGGCTGGACTGCATCATTCTAAGATATATCCCAAATTTTGATGGGAAAGGTGTTTGTCAACCGATGTTTAGAATTTATGGACAGGATCCGGCTCGTGCCGATAAAAGTTCGAATATCTTGTACTCAATGCCAAAGAGAGCCAAAAATGTCAGGGCTTACAAGCAGGGAGAGTATGAACTGATTATAGTTGACATCAATTGTCATGTTAAAGGTGATGTCCTTATTGAGAGTATTAACTTGAAGGGTGACATGGAGAGTGAACAAATGATGTTCCATACAATGTTCAACACTGCTTTTCTCAGGTCCAACATATTGATGCTTAACCGGGATAAGGTTGATATTTTATGGGATGCTAAAGATCAATTCCCTAAGGATTTCAGAGCAGAGATACTTTTCTCAGAGATGGATGTTGCTACAGCTGTTCCTGAGAATGGTACATCATGGTTTGAGGAGAAGGAGGGACTTCCGGTTGAAGCATTTTCCAAAGCTCAAGAGATCTTTAGCAATGGAGATTGGATGAGTCCTAGGGAAGATCCTGCATTGCAACAGCGGCGTGCTTCGGATATCATGCAAGAGAAGTTGGATGCAAGTTCAGACCAGTATATGGAGAGTGACACTTTTTCGCATCGAACCGGTCCTAACATGCCTCAGGAGAAAAAGAATACAGCAAAATGCTTCTCACCCTCAAATTTGGAAATCAAATCTGGGTCCTCACCCAAGAAAAAACATGATAATGATGTGAGCAGAAAAGAGGATAAGAACATCGAGGTCGACGCTACTCCACGACAGTCTAGTTGTCCTGATTCCAACACTTCTATGCAAAATATGAGTCCAAAAATGACTCAGAAGAAAAAGAAAGAAGAAAATTGCCTCCTGACCTCAAATTTGGATGCTCATTCTGTGTCCTCAACTACGAAAACTCAAGATAATGGTATGAGCAGGAAAGAGGATAAGGCCAAGAAGATTGGTGCTACTCCACCACAACCTAGTTGTTCTGACTCCACCACTTCTTTGCATCAAACAGGCTCTAAATTGCCTCAAGAGAAAAGTAAAGAAAACGCGGACTTGCCCCCGAGTTTGGAAGTCCATTCTGTGTCCTCAACTAAGAAATCCTCAAATAATGGTATGATCCGGAAAGAAGATAAGGCCAACAAGGATGATGCTACTCCACTACAGCCTAGTTGTTCCGACTCCACCACTTCTTTGCATCAAACAGGCTCTAAATTGCCTCAAGAGAAAAGTAAAGAAAACGCGGACTTGCCCCCGAGTTTGGAAGTCCATTCTGTGTCCTCAACTAAGAAATCCTCAGATAATTGTATGATTAGGAAAGAAGATAAGGCCAACAAGGATGATGCTACTCCACGACAGCCTAGTTGTTCCGATTCCACCACTTCTTTGCATCAAGCAGGTTCTAAAACGCCTCAAGATAAAAGGAAAGAAGAAAATCACTTATTGCCCCCAAATTTGGAAGCCCATTCTGTGTCCTCAAATAAGAAAATCCCAGATAATGATATAAGTAGAAACGAAGATAAGACCGTCAAGGTTGATTCTACACTACAACGGCCTAGTAATTCTAATTCCACGACTTCACATCAAACAAGTCCTATAATGCCTCAAGGGAAAAAGAAAGAAGCAAATTATATACCATCCTCAAATTTGGAAAGCCAGTCTATGCACTCGACTACGAAAACACCAGATAATAATGTGAGCACAAAACAAGATAAGACTATAGAGGTCAATGCTACTCCACCACGGTCTAGTAGTTCTGATTTCATCACTTCTTCGCATCAAACAGGTTATACAATGCCTCAGGAAAAAAAGAAAGAAGCAAATTGCATCGTGCCGCCAAATATGGAAGTTCAATCAGTGTCCTCAACTAAGCAAACCTCGGATAATTATATTAGCAGAAAAGAGGATAAGACCATCAAATTTGACTCTACTCCTCAACAGCCTAATAGTTTTAATTCCACCACTTCTTCACAAAAAACAGATCCTACAATGCCTCAAGGGAAAAAGAAAGAAGCAAATTCCATCTTATCCTCAAATTTGGAAAACCAGTCTGCTCCTTCAACTAAGAAAACACCAGATAATGATAAGAGCAGAAAATATGATAAGACCACCAAGGTTGACGCTAGTCCACCGCAACCTAGTAGTTCTGATTCCACTTCTTCTTCGCATCAAACAGATCCTATAATGCCTCAGAAGAAAAAGAAAGAAGGCAATTGCATCTTGCCCTCAAATATGGAAGTTCAGTCAGTGTCCTCAACTAAGCAAAACCTTAATAAAGATATGAGAAGAAAAGAGGATGAGGCCATCAAGGTTGATGCTACACTACCACGGCCTAGTAGTAGTTCAGACTCCACCACTTCTTTTCACCAAACAGGTTCTAAAGTACCTCAGGAAAAAGAGAAAGAAGCAAATTATACCTTGCCTTCAAATTTGGAAAGCAAGCCTGTGCCCTCAACAAAGAAATCCCTTGATAATGATATAAGCAGAAAGGAGGATAAGGCCATCAAGGTTGATGCTACTCCACCGCGGCCTAGTAGCTCAGACTCCACCACTTCTTTTCACCAAACAGGTTCTGAAATGCCTCAGGAAAAGCCGAAAGAAGCAAATTCCGTTTCGCCCTCAAATTTGGAAAGCAAGCCCATGCCATCAACTAATAAAATCCCAGATAATGATACGAGAAGTAAACAAAATAAGACAATCAATGTTGATGCTAGTCCAGCACGGTCTACTAGTTCTGATTCGACCACTTCTTCGCATCAAACAGGTTCTAAAATGCCTCATGAGGTAAAGAAAGAAGCAAATTGCTTCTTGCCCTCAAATTTGGAAATACAGTCTGTGTCCTCAACTAAGCATACCCCGGATAATGATACGAACAGAAAAGAGGATAAGACCGTCAAGGTAGAGTTTGCTCTACCAGGGCCAGATTCTAAAAGTCTCTACAGTAAGCAGAATTCATCTGAGTGTTCCTTACCTAGTTCTGTGGATACCTCTTCTAGTGATTCAATCTCACCACAAACACCTCCACCACAGTCTCATGTGACTAGAAGTGCTAAAGAAGTTCATGATTATCCTCCTCACAAGGAATCCTCTTCACCATTGAAATCAAGAAATCTTGCAACTCAAGAAACCAAATCCAATTCACAAGACAGAAATCAGTCACTCAATTTTACCTCTAAAAATGAGACTGCATCCTCATGTACTTACCAAAATAAGTCACAAACTGATGCTGGTTCTCATCCACCAGCTTCTGAAATCACTTCAACTAAGCTACCTCCTCCACATTCTCCAGTTTCTTCACCAACATGTATGAAAAATATTTTACCTGTTAGAACAAGACTTGATTCTTCTCCTTCTAAAACTCAAGCACCACTATCTCCACACACTCCTCCACAAAAGGATCAAGAGACAATTAGAATAAGACATCCTCCATCTCCACCAACACCTCCTCCAAAGAATGAAAAACATGCCAATACTGAACCTTCTCTTTCCCCTCCACCACCACCTCCACCTCCTTGTCTTTATAGGAAAGCTGAAAGTTCTACTATAGCACCACCTCCACCACCACCGCCACCTGCAGCTGCAGAACATTCCTCCAATTCTGCATTGCAGAAGTCTGCACATGTTCCTGCTGCACCAGCTGCTCCACCACCTCCAACTGTATATAGTAAAAGTGGTCTAAAATCAGATAATGGTTTTCCCATGTCACTTTCGGGTATGGCAGGCGTAGAAGGACGTCGATCTAGTCCTAAAGGAAGAACTCTATCACATATAATAAGTGCAAAGAATAACACCAAGAAGTTGAAGCCATTGCATTGGATGAAACTATCTAAAGCAGTGAAAGGAAGTTTGTGGGATGAGACACAGAAATCTGATGAAGCTTCAAAAGCACCAGAGATTGATATGTCAGAGCTTGAAAATCTCTTCTCAGCACCAGTCCCAAGTAAAGGCCATGCCAAAAAGTCAAATATCCAAAATTCAGTTGGGCCTAAATCTGATAAAGTGCAATTGATTGACCATACACGAGCATATAATTGTGAAATCCTACTTTCAAAAGTGAAAGTGCCATTGCAAGATTTAATGAGCTCAGTACTAGCACTAGAAGAGTCAGTATTGGACACTGACCAGGTTGAGAATCTGATGAAGTTTTGTCCTACCAAAGAGGAGATAGAAGTACTTAAGGGCTATACTGGAGAAAAGGAGAAGCTAGGGAGATGTGAACAGTTTTTCCTGGAGTTGATGAAAGTACCAAGGGTAGAATCTAAACTCAGAGTTTTCTCATTCAAGATTGAGTTCCACTCTCAGGTTTCTGACCTTAGAAATAGCCTGCATGTTGTTAATGCTGCTTCAGAAGAGGCATGGAAATTTTCTTTTATACTTGAACTCTTTATAATCAGGAATTCTATCAAATTAAAGAGAATCATGCAAACAATACTTTCTCTAGGGAATGCTTTGAACCAAGGAACTGCCAAGGGCTCTGCTATTGGATTCCGATTGGATAGCCTTCTTAAACTTACAGAGACACGGTCCCGGAACAACAAGATAACTCTCATGCATTATCTTTGCAAGGTTCTGGCAGATAAATTACCAGAAGTTTTAGATTTCTCTAAGGATCTTGCTAACTTAGAACCAGCAGCAAAGATTCAATTGAAGTTTTTGGCAGAGGAGATGCAAGCTATAAGGAAGGGATTAGAGAAAGTTAAACATGAACATTCAAGTTCTGAAAATGATGGTTCTATATCAGAAACTTTCTGCAAGAATTCCAAGGAATTTCTCTGTTCTGCGGAGGCAGAAGTCTCTTCCTTGGCTTCACTATACTCTGTTGTGGGAGGTAATGTGGATGCTTTGATTATTTATTTTGGTGAAGATCCAACCCGTTGCCCTTTGGAGCAAGTGGTCACAACTTTGCTCAACTTCACTGGAATGTTCAACAAAGCCAATGAAGAAAACCACAACCAGCTTGAGCTTGAAATGAAGAAGACAGAAGAAAGTGCAACAAAGAAATGA 5625 0.4078 MSMQRKQCSWNVPNGLLQISHRVYVFDSCLTLEYDWSKDQYKEYTNRIVGQFLENVQDASIMVCNFHEEDAKLRTTNNFCKHNVTVMDYPGQYQRWPVPKMEVICEFLKSCGNWLSHGEQNVLLMHCDRGGGWHVLAFMLAALLIFRKQCNGEEMALDMVYKQAPREILHLMMPLDPISSQLRYLEYVSKWNVALDWPELDRALRLDCIILRYIPNFDGKGVCQPMFRIYGQDPARADKSSNILYSMPKRAKNVRAYKQGEYELIIVDINCHVKGDVLIESINLKGDMESEQMMFHTMFNTAFLRSNILMLNRDKVDILWDAKDQFPKDFRAEILFSEMDVATAVPENGTSWFEEKEGLPVEAFSKAQEIFSNGDWMSPREDPALQQRRASDIMQEKLDASSDQYMESDTFSHRTGPNMPQEKKNTAKCFSPSNLEIKSGSSPKKKHDNDVSRKEDKNIEVDATPRQSSCPDSNTSMQNMSPKMTQKKKKEENCLLTSNLDAHSVSSTTKTQDNGMSRKEDKAKKIGATPPQPSCSDSTTSLHQTGSKLPQEKSKENADLPPSLEVHSVSSTKKSSNNGMIRKEDKANKDDATPLQPSCSDSTTSLHQTGSKLPQEKSKENADLPPSLEVHSVSSTKKSSDNCMIRKEDKANKDDATPRQPSCSDSTTSLHQAGSKTPQDKRKEENHLLPPNLEAHSVSSNKKIPDNDISRNEDKTVKVDSTLQRPSNSNSTTSHQTSPIMPQGKKKEANYIPSSNLESQSMHSTTKTPDNNVSTKQDKTIEVNATPPRSSSSDFITSSHQTGYTMPQEKKKEANCIVPPNMEVQSVSSTKQTSDNYISRKEDKTIKFDSTPQQPNSFNSTTSSQKTDPTMPQGKKKEANSILSSNLENQSAPSTKKTPDNDKSRKYDKTTKVDASPPQPSSSDSTSSSHQTDPIMPQKKKKEGNCILPSNMEVQSVSSTKQNLNKDMRRKEDEAIKVDATLPRPSSSSDSTTSFHQTGSKVPQEKEKEANYTLPSNLESKPVPSTKKSLDNDISRKEDKAIKVDATPPRPSSSDSTTSFHQTGSEMPQEKPKEANSVSPSNLESKPMPSTNKIPDNDTRSKQNKTINVDASPARSTSSDSTTSSHQTGSKMPHEVKKEANCFLPSNLEIQSVSSTKHTPDNDTNRKEDKTVKVEFALPGPDSKSLYSKQNSSECSLPSSVDTSSSDSISPQTPPPQSHVTRSAKEVHDYPPHKESSSPLKSRNLATQETKSNSQDRNQSLNFTSKNETASSCTYQNKSQTDAGSHPPASEITSTKLPPPHSPVSSPTCMKNILPVRTRLDSSPSKTQAPLSPHTPPQKDQETIRIRHPPSPPTPPPKNEKHANTEPSLSPPPPPPPPCLYRKAESSTIAPPPPPPPPAAAEHSSNSALQKSAHVPAAPAAPPPPTVYSKSGLKSDNGFPMSLSGMAGVEGRRSSPKGRTLSHIISAKNNTKKLKPLHWMKLSKAVKGSLWDETQKSDEASKAPEIDMSELENLFSAPVPSKGHAKKSNIQNSVGPKSDKVQLIDHTRAYNCEILLSKVKVPLQDLMSSVLALEESVLDTDQVENLMKFCPTKEEIEVLKGYTGEKEKLGRCEQFFLELMKVPRVESKLRVFSFKIEFHSQVSDLRNSLHVVNAASEEAWKFSFILELFIIRNSIKLKRIMQTILSLGNALNQGTAKGSAIGFRLDSLLKLTETRSRNNKITLMHYLCKVLADKLPEVLDFSKDLANLEPAAKIQLKFLAEEMQAIRKGLEKVKHEHSSSENDGSISETFCKNSKEFLCSAEAEVSSLASLYSVVGGNVDALIIYFGEDPTRCPLEQVVTTLLNFTGMFNKANEENHNQLELEMKKTEESATKK 1874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1364 1874 MobiDBLite consensus disorder prediction 676 690 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 1160 1175 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 641 656 - -
Lal4g1364 1874 PANTHER FORMIN-J 2 613 - -
Lal4g1364 1874 PANTHER FORMIN-J 943 1872 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 440 462 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 1222 1236 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 531 548 - -
Lal4g1364 1874 Coils Coil 1850 1870 - -
Lal4g1364 1874 Gene3D Protein tyrosine phosphatase superfamily 5 194 IPR029021 -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 593 612 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 404 439 - -
Lal4g1364 1874 Coils Coil 954 981 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 497 513 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 877 897 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 463 483 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 1145 1159 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 1184 1220 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 1030 1045 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 657 675 - -
Lal4g1364 1874 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1477 1867 - -
Lal4g1364 1874 Coils Coil 1756 1776 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 1367 1381 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 1306 1339 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 1010 1029 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 1237 1299 - -
Lal4g1364 1874 SMART it6_source 416 1864 IPR015425 -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 399 1459 - -
Lal4g1364 1874 Gene3D Formin, FH2 domain 1463 1860 IPR042201 -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 821 835 - -
Lal4g1364 1874 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 189 IPR029021 -
Lal4g1364 1874 ProSiteProfiles C2 tensin-type domain profile. 201 339 IPR014020 -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 914 934 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 964 979 - -
Lal4g1364 1874 SMART PTEN_C2_2 199 1600 IPR014020 -
Lal4g1364 1874 Pfam C2 domain of PTEN tumour-suppressor protein 202 338 IPR014020 -
Lal4g1364 1874 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 204 339 IPR035892 -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 1049 1130 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 706 720 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 982 1000 - -
Lal4g1364 1874 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1464 1874 IPR015425 -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 721 805 - -
Lal4g1364 1874 Pfam Formin Homology 2 Domain 1468 1849 IPR015425 -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 898 912 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 949 963 - -
Lal4g1364 1874 Gene3D - 199 341 - -
Lal4g1364 1874 MobiDBLite consensus disorder prediction 849 870 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1364 Lal-Chr4 17873580 17885977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1364 1 402 Protein tyrosine phosphatase (PTP) family AT5G58160 50.864 4.61e-129 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1364 - - lang:109326139 2185.99