Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1357 ATGAGAATAATAATGGATATAAAGTGTTCAAATTTGATTATGGCATCTCAAACAAAGGGCCGTTTTCTCTTCTTCTTCTTCTTGTGCATATTAACCATTCCAATGTCTTTAACTGTTGCTGTGAATAAAGAGCAAGAACAAGATCGAATCTTGAGCCTCCCAGGGCAACCACCAGTGACATTTTCTCAGTTTTCTGGTTATGTTACTGTCAATGAGCAACATGGTCGAGCACTCTTCTATTGGTTCACTGAGGCCACTACTTCCCCTCAGAATAAACCTCTTCTTCTATGGCTAAATGGAGGGCCAGGTTGCTCATCTGTGGCATATGGAGCATCAGAGGAAATTGGACCATTCCGCATTAACAAAACTGGCTCTTCTCTCTATCTAAACAAATATGCATGGAATAAAGAAGCAAATATCCTATTTCTTGAATCACCCGCTGGAGTTGGATTTTCATACACAAATACAACCTCTGACCTCAAAAATTCTGGTGACAAAAGGACAGCTCAGGATTCTCTTATTTTTCTACTTAGGTGGATTTCAAGATTTCCACAATATAAATATAGGGAATTTTATATTGCTGGGGAGAGCTATGCAGGTCATTATGTTCCTCAATTAGCTAAGAAAATTCATGACTATAATAAACAAAATCCACATATTCTTAATCTCAAAGGATTCATTGTGGGAAATGCTGTGACTGATAACTACTATGATGGGTTAGGAACTGTCACATATTGGTGGAGCCACTCTATGATATCTGATAAATCATATAAATCTATCCTCAAATACTGTAATTTTACAGAAGATAAAACATCTCAAAAATGTGACAATGCAGTGAGTTATGCAGTTAATCATGAATTTGGAAAAATTGATCAATACAGTATTTATACCCCTACATGCACTACATCACACAATAATTCATTAAGGAACATAAGGTTCAAGGGTTCAATTTTACATAGAATTTCTGGGTATGATCCATGTACTGAAGATCATGCAGAGAAATATTATAATCATCCTGAAGTGCAAAAAGCAATGCATGCAAATGTTACAAAAATTCCATATAAATGGACTGCTTGCAGTGATGTTCTCATAAAACAGTGGAAGGATTCTGATGTTTCAATATTGCCCATATACAAAGAATTAATTGCAGCAGGTTTGAGAATCTGGGTTTTCAGTGGGGACACAGATTCAGTGGTTCCAGTAACAGCAACTAGGTTTTCTGTGAACCATCTCAACCTCACCATTAAAACTCATTGGTATCCATGGTACTCAGGCAAACAAGTAGGTGGATGGACAGAAGTTTATGATGGATTAACTTTTGCAACAGTAAGAGGAGCAGGTCATGAGGTACCATTGTTTCAGCCAAAAAGGGCTTACACACTTCTCAAAACATTTTTAGCAGCCAAACAACTCCCAAAATCTTGA 1425 0.3691 MRIIMDIKCSNLIMASQTKGRFLFFFFLCILTIPMSLTVAVNKEQEQDRILSLPGQPPVTFSQFSGYVTVNEQHGRALFYWFTEATTSPQNKPLLLWLNGGPGCSSVAYGASEEIGPFRINKTGSSLYLNKYAWNKEANILFLESPAGVGFSYTNTTSDLKNSGDKRTAQDSLIFLLRWISRFPQYKYREFYIAGESYAGHYVPQLAKKIHDYNKQNPHILNLKGFIVGNAVTDNYYDGLGTVTYWWSHSMISDKSYKSILKYCNFTEDKTSQKCDNAVSYAVNHEFGKIDQYSIYTPTCTTSHNNSLRNIRFKGSILHRISGYDPCTEDHAEKYYNHPEVQKAMHANVTKIPYKWTACSDVLIKQWKDSDVSILPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSVNHLNLTIKTHWYPWYSGKQVGGWTEVYDGLTFATVRGAGHEVPLFQPKRAYTLLKTFLAAKQLPKS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1357 474 Pfam Serine carboxypeptidase 55 467 IPR001563 GO:0004185|GO:0006508
Lal4g1357 474 PANTHER SERINE CARBOXYPEPTIDASE 24 30 473 - -
Lal4g1357 474 Gene3D - 327 364 - -
Lal4g1357 474 Gene3D alpha/beta hydrolase 44 302 IPR029058 -
Lal4g1357 474 ProSitePatterns Serine carboxypeptidases, serine active site. 193 200 IPR018202 GO:0004185
Lal4g1357 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 142 IPR001563 GO:0004185|GO:0006508
Lal4g1357 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 143 153 IPR001563 GO:0004185|GO:0006508
Lal4g1357 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 204 IPR001563 GO:0004185|GO:0006508
Lal4g1357 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 438 451 IPR001563 GO:0004185|GO:0006508
Lal4g1357 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 473 IPR001563 GO:0004185|GO:0006508
Lal4g1357 474 SUPERFAMILY alpha/beta-Hydrolases 45 469 IPR029058 -
Lal4g1357 474 ProSitePatterns Serine carboxypeptidases, histidine active site. 438 455 IPR033124 GO:0004185
Lal4g1357 474 Gene3D - 374 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1357 Lal-Chr4 17770163 17781473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1357 332 471 Calmodulin-binding Proteins AT2G22960 27.660 3.87e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1357 K16297 - gmx:100783242 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1357 4 17770163 17781473 Lal4g1357 4 17770163 17781473 ECH