Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1349 ATGCAGCAAGGTGATCAAACGGTTCTAAGTTTAAGGCTTGGTGGTGGTGGTGGTGGTGGCCGTCGTGGCGGCGGAACCAACCTCCTCGCTCATCGATTCGATTCTTCGTCCTCTGCTTTTGCTTCTTTAACCGCTGATATCTCATTCTTACACCCTCAAGTCGCCACCGCCATCGCCTCTTCTATCAAGGCTGGAGATTCATGGCCTGAGGGTCATGAGCATGTGCGATATACCAGAGACCAGCTTTTACACCTTAGAGAGGTTCTTGAAGTCCCCAACAATATTTTAAAGATCAAACAAGATATAGAAGCTGAGCTTTTTGGTGAAGTTCAAAGTTGGGGCCATACAGAAAGCAACCCTACACAACAAATTCAAAATCAATACTCTGAGCTAGATAACCGTGACTGGCGTGGTCGTTCTGGACAACTCCCTACTAATCCAGATGAGTTCGGTAGTAGATTTGACTCCAGACAGCAGGATGCTAGCCAGGTTAATCGCCAAGGCCAACTGAATTCCCAGTTTGCAAGTTCTTACCAAGGGGGAGGACCTACTCCTACTCTAACCAAGGCTGAGGTTCCATGGGGAAGTCTTTCTGAAAAGGACCGTGTCTTGAAGACTATGAAAGGAATACTAAATAAGTTGACTCCTGAGAAGTTCGATCTACTGAAGGGTCAGTTGATCGATTCTGGCATTACTTCTGCTGACATATTGAAGGGAGTCATTTCACTTGTATTTGATAAGGCTGTTCTAGAGCCAACATTTTGCCCCATGTATGCTCTGCTATGTTCTGATCTTAATGAAAAGCTGCCTCCTTTCCCATCGGAAGAACCCGATGGGAAAGAAGTCACTTTTAAGAGAGTACTCTTGAATACCTGCCAGGAGGCTTTTGAAGGTGCATATAATTTGAGGGAAGAATTAAAACAAATGAGTGCCCCTGAGCAGGAGATGGAGCGTATGGATAAGGAAAAAATGATCAAGCTTCGCACACTTGGAAATATCCGTTTAATTGGTGAGCTGTTGAAACAGAAGATTGTTCCTGAGAAGATTGTCCATCACATTGTTAAGGAGCTTTTAGGAGCCCCAGACAACAAGGCTTGTCCAGCTGAGGAAAATGTTGAAGCCATATGCCAATTTTTCAACACTATCGGCAAGCAGGTGATGAAAGTCCTAAATCACGACGTATAA 1185 0.4473 MQQGDQTVLSLRLGGGGGGGRRGGGTNLLAHRFDSSSSAFASLTADISFLHPQVATAIASSIKAGDSWPEGHEHVRYTRDQLLHLREVLEVPNNILKIKQDIEAELFGEVQSWGHTESNPTQQIQNQYSELDNRDWRGRSGQLPTNPDEFGSRFDSRQQDASQVNRQGQLNSQFASSYQGGGPTPTLTKAEVPWGSLSEKDRVLKTMKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLVFDKAVLEPTFCPMYALLCSDLNEKLPPFPSEEPDGKEVTFKRVLLNTCQEAFEGAYNLREELKQMSAPEQEMERMDKEKMIKLRTLGNIRLIGELLKQKIVPEKIVHHIVKELLGAPDNKACPAEENVEAICQFFNTIGKQVMKVLNHDV 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1349 394 Pfam MIF4G domain 204 385 IPR003890 GO:0003723|GO:0005515
Lal4g1349 394 Gene3D - 195 392 - -
Lal4g1349 394 MobiDBLite consensus disorder prediction 134 166 - -
Lal4g1349 394 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 387 - -
Lal4g1349 394 MobiDBLite consensus disorder prediction 145 166 - -
Lal4g1349 394 SMART if4_15 204 393 IPR003890 GO:0003723|GO:0005515
Lal4g1349 394 MobiDBLite consensus disorder prediction 1 23 - -
Lal4g1349 394 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 387 IPR045208 GO:0003743
Lal4g1349 394 SUPERFAMILY ARM repeat 198 386 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1349 Lal-Chr4 17702043 17709498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1349 1 386 Eukaryotic Initiation Factors Gene Family AT5G57870 61.905 6.93e-148 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1349 K03260 - qsu:112025127 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1349 4 17702043 17709498 Lal4g1349 4 17702043 17709498 ECH