Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1285 ATGGAAGATATATGGTTGAGTTCAATTCTGATTTTTATGTCTTGTTTTGCAGTAAAAGCCCAACTGAAAAATGGGTTTTACTCTTCTTCATGCCCAAGTGCAGAAACCATAGTAAGGTCCACAGTTGAATCCTACTTCAATAAAGATCCTACCATTGCTCCTGGCCTGCTTAGGCTTCATTTCCATGATTGTTTTGTCCAGGGGTGTGATGGTTCAGTTCTGATAGCAGGATCTTCTGCAGAGAGGAATGCATTTCCAAACATTGGGTTAAGAGGTTTTGAAGTGATTGAAAATGCTAAATCACAGATTGAGACCAAATGCCCTGGAGTTGTCTCATGTGCTGACATACTAGCATTGGCTGCTCGTGATGCTGTCGACTTGAGTAATGGTCCAAGTTGGTCAGTGGGCACAGGAAGAAGGGATGGGAGGGTTTCTTTATCATCTGAAGCATCAAATATGCCATCTCCACTTGACACTGTCTCTATCCAAAGACTAAAGTTTGCTGACAAAGGCCTAGATGACCATGACCTTGTCACCCTACTTGGAGCACATACTATAGGGCAGACAGAGTGCAGATTCTTCAGTTACCGTCTATACAATTTCACTACCACTGGCAATTCAGATCCAACTATAAACCAAGCTTCCTTATCTCAACTTCAAACACTTTGTCCCAAAAATGGAAATGGCTTAACAAAGGTTCCATTAGATAAAGATAGTCCAGCCAAATTTGATGTTAGTTTCTTCAAAAATGTACGTGATGGTAATGGGGTTCTAGAATCAGATCAAAGACTATGGGGAGATTCTGCTACTAGAAGTGTTGTTCAAAGTTATGCTGGGATTATAAGAGGATTATTGGGTTATAGATTTGATCAAGAATTTCCTAAGGCTATGATTAAATTGAGTAATATTGAGGTTAAGACTGGTACACAAGGAGAGATTAGAAAAATATGTTCAAAATTTAATTGA 966 0.3934 MEDIWLSSILIFMSCFAVKAQLKNGFYSSSCPSAETIVRSTVESYFNKDPTIAPGLLRLHFHDCFVQGCDGSVLIAGSSAERNAFPNIGLRGFEVIENAKSQIETKCPGVVSCADILALAARDAVDLSNGPSWSVGTGRRDGRVSLSSEASNMPSPLDTVSIQRLKFADKGLDDHDLVTLLGAHTIGQTECRFFSYRLYNFTTTGNSDPTINQASLSQLQTLCPKNGNGLTKVPLDKDSPAKFDVSFFKNVRDGNGVLESDQRLWGDSATRSVVQSYAGIIRGLLGYRFDQEFPKAMIKLSNIEVKTGTQGEIRKICSKFN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1285 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 176 186 IPR019793 -
Lal4g1285 321 PANTHER PEROXIDASE 8 319 - -
Lal4g1285 321 Gene3D - 25 321 - -
Lal4g1285 321 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Lal4g1285 321 Gene3D Peroxidase, domain 2 154 300 - -
Lal4g1285 321 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal4g1285 321 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal4g1285 321 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal4g1285 321 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal4g1285 321 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal4g1285 321 PANTHER PEROXIDASE 25-RELATED 8 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal4g1285 321 SUPERFAMILY Heme-dependent peroxidases 21 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal4g1285 321 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal4g1285 321 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal4g1285 321 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal4g1285 321 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal4g1285 321 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal4g1285 321 PRINTS Plant peroxidase signature 175 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal4g1285 321 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal4g1285 321 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal4g1285 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal4g1285 321 CDD secretory_peroxidase 21 320 IPR033905 GO:0004601|GO:0042744
Lal4g1285 321 ProSiteProfiles Plant heme peroxidase family profile. 21 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal4g1285 321 Pfam Peroxidase 38 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1285 Lal-Chr4 16895288 16898662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1285 9 321 Peroxidase AT2G41480 70.064 7.64e-170 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1285 K00430 - gmx:100806700 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1285 4 16895288 16898662 Lal4g1285 4 16895288 16898662 ECH