Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1157 ATGGATCCTCCTCTTATCAACGACTCTACATTCACTCCAGCTAACCCATCAGCTTACACGCTTTCCGAGATTTGGCCCTTTTCTGCCACCGAACCCCACACCACCGCCACTGGAGGGTTGCGCCTCCGGATTGGTAATTTAGTTCACGGTGTCAATCTGACTTCTTCATTCGCTGCTGCGGACACTTGTCGTTCCATGCTTCGTGATGGCTCCGCCGAGGAATCCACCGTCACCGAGCAGAGTGGCGGTGGCCATGTCGGTGCTACAAGGAATCAGAGGAAACGGAAGTGTGCCACTTCCGAGGACGAGTATTCCAAGTTCGTTTCCACCAGCAGTGCCAATGAATTGAATGATTGTGATGATAAACGGATAAAATTAAGGGGATCCACCATTGAGAATGGTGATTTAAAGGCTGAAGTAGATGAAAGTTCAGAAGCTGGTAACAAGTCAGATGAACTAAGCACGAATCCTTCTGAACCAGCTAAGCAAGACTATATTCATGTGAGAGCACGAAGGGGCCAAGCTACCGATAGCCACAGTCTAGCAGAGAGATTACCATTTATTCTGGCAAGAAGAGAAAAGATCAGCGAGAGGATGAAAATTCTTCAGGATTTGGTCCCTGGTTGTAACAAGGTAATTGGTAAAGCACTTGTTCTAGACGAGATAATCAATTACATCCAGTCGCTGCAGCATCAGGTTGAGTTCCTTTCAATGAAGCTTGAAACAGTTAATTCGTTACCGAACATAGTGAACCCTACTCTGGAGGGGTTTTCTTCAAAGGATGTTAGTACTCGACCATTTGACGCTGCTGAAATGATATTTGGATCACAAGGCGCAAGAGGGGATGCTCAGGGATCACGGCCTGGATGGTTGCATATCCAGATAGGTGGTGGTTTCGAGAGATCAACATGA 912 0.4704 MDPPLINDSTFTPANPSAYTLSEIWPFSATEPHTTATGGLRLRIGNLVHGVNLTSSFAAADTCRSMLRDGSAEESTVTEQSGGGHVGATRNQRKRKCATSEDEYSKFVSTSSANELNDCDDKRIKLRGSTIENGDLKAEVDESSEAGNKSDELSTNPSEPAKQDYIHVRARRGQATDSHSLAERLPFILARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSMKLETVNSLPNIVNPTLEGFSSKDVSTRPFDAAEMIFGSQGARGDAQGSRPGWLHIQIGGGFERST 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1157 303 CDD bHLH_AtBPE_like 164 245 - -
Lal4g1157 303 MobiDBLite consensus disorder prediction 70 87 - -
Lal4g1157 303 PANTHER BNAC05G07950D PROTEIN 1 303 - -
Lal4g1157 303 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 303 IPR024097 GO:0006355
Lal4g1157 303 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 172 248 IPR036638 GO:0046983
Lal4g1157 303 MobiDBLite consensus disorder prediction 70 104 - -
Lal4g1157 303 MobiDBLite consensus disorder prediction 135 162 - -
Lal4g1157 303 Pfam Helix-loop-helix DNA-binding domain 191 230 IPR011598 GO:0046983
Lal4g1157 303 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 229 IPR011598 GO:0046983
Lal4g1157 303 SMART finulus 180 235 IPR011598 GO:0046983
Lal4g1157 303 Gene3D - 171 248 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1157 Lal-Chr4 15050450 15054263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1157 1 303 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 49.836 1.35e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal4g1157 HLH 8.1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1157 - - lang:109336984 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0752 21 6197320 6204026 Lal4g1157 4 15050450 15054263 LSH