Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g1142 ATGGAAGAAACATTTGTTCCCTTCCGTGGGATAAAAAATGATCTAAAAGCAAGAATTCTGTGCTACAAACAAGATTGGACTAGTGGAATCCAAGCTGGTATCAGGATCCTTGCGCCAACTACATACATATTTTTTGCTTCAGCCATTCCAGTTATCTCTTTCGGGGAGCAACTGGAGAGCAGTACCGATGGAACTCTCACTGCTGTGCATACTCTTGCATCAACGGCACTCTGCGGTATTATCCACTCCATCATTGGAGGACAGCCTCTCCTCATACTTGGTGTAGCCGAGCCAACAGTTCTGATGTATACATTCCTGTACGACTTTGCAAAGGATCAAAAGGATTTGGGACCCAAACTATTTCTTCCTTGGACTGGATGGGTGTGTGTTTGGACATCCCTGTTGCTTTTCTTGCTGGCCGTTCTTGGTGCATGCTCCATAATCAACAGATTCACACGCATTGCTGGTGAACTATTTGGTTTGCTAATTGCAATGCTCTTTATGCAGCAGGCTATAAAGGGACTTGTTGAAGAGTTTGGTGTACCCAAGACCCACAATGAAAATACCAATCCAATTGCGCTCCAATCCTCCTGGCTGTTCGGGAATGGAATGTTTGCCTTGGTTTTGTCATTTTGCCTTCTTTTTACTGGACTACAAAGCCGCAAGGCTAGAGCCTGGCGTTATGGGACAGGTTGGCTACGAGGATTTATAGCTGATTATGGAGTCCCTCTATTGATTCTCGTGTGGACCGCTGTGTCTTACATACCATCCAATCAGGTCCCAAGGGGAATCCCGAGGCGGCTTTTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCTAATTGGACTGTTATCAAGGAAATGTTGAATGTGCCCACCTTATATATTATTGGAGCATTTATACCGGCAACTATGATTGCCGTGCTTTACTATTTTGATCACAGTGTTGCTTCACAACTTGCGCAGCAAAAGGAGTTCAATCTAAGAAAACCCTCATCTTATCATTATGACCTGCTTCTCTTGGGCTTTTTGACCTTATTGTGTGGGCTTATTGGAATCCCTCCCTCCAATGGTGTAATTCCACAATCTCCGATGCATACGAAAAGCTTAGCTACCCTAAAACATCAGCTTTTGCGGAACAAGCTTGTATCTACTGCACGAAAAAGCATGCGGAGAAATATGAACCTGAGCCATTTTTACCAAAGCATGAAAGATGCATATGATGAAATGCAGACTCCATTGGTTCACCAAATGCCATCTACTCTGGGGCTGAAAGAGCTGAAGGAATCTACCATTCAACTGGCTTCAAGTCATGGATACATTGACGCCCCTGTTGATGAGATTGTCTTCGATATGAATAACGATGTTGATGAACTTTTGCCAGTTGAAGTTAAAGAGCAGCGCCTCAGCAATCTACTGCAGGCGTTAATGGTTGCAGCTTGTGTTGGTGCTATGCCTCTTCTGAAGAAGATACCAACTTCAGTGCTTTGGGGTTACTTCGCTTTCATGGCTATTGAAAGCTTGCCTGGAAATCAGTTTTGGGAGAGAATATTGTACCTTTTTACTGCTCCAAGTCGACGATACAAACTTCTGGAGGAATACCATGCGAACTTTGTCGAGTCCGTTCCCTTCAAAGCAGTTGCCATGTTTACCATATTCCAGACAACATACTTGCTTCTCTGCTTTGGCATAACTTGGATACCAATTGCTGGGGTCCTTTTCCCATTGTTAATCATGCTTCTTGTACCAATAAGACAATATATTCTCCCTATGTTTTTCAAAGGAGCTCATCTTCAAGAGTTGGATGCTGCAGCATATGAGGAAGCACCTGCCAATGCTTTCAACATGTCCTTTGAAGATCTACACAGTCAGGCAACAACAGTCAATATCACTGGTGGGGAAATTCTTGATGAAATTATTACTAGGAGTCGTGGCGAGATTCGCCGCACTCACAGCCCCAAAACAACAAGTTCAACACCAACTTCATCTGGAGATATAAGGCCTGCTAATAGCCCACAATTATCGCGCCGGATTCCTAGCCCTCGAATAAGTGAATTGAGAGGGGAAAGCAGCCAAGGAGCAATTGGGAAGGAGATCATGTTAAAGTAG 2109 0.4405 MEETFVPFRGIKNDLKARILCYKQDWTSGIQAGIRILAPTTYIFFASAIPVISFGEQLESSTDGTLTAVHTLASTALCGIIHSIIGGQPLLILGVAEPTVLMYTFLYDFAKDQKDLGPKLFLPWTGWVCVWTSLLLFLLAVLGACSIINRFTRIAGELFGLLIAMLFMQQAIKGLVEEFGVPKTHNENTNPIALQSSWLFGNGMFALVLSFCLLFTGLQSRKARAWRYGTGWLRGFIADYGVPLLILVWTAVSYIPSNQVPRGIPRRLFSPNPWSPGAYSNWTVIKEMLNVPTLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSTARKSMRRNMNLSHFYQSMKDAYDEMQTPLVHQMPSTLGLKELKESTIQLASSHGYIDAPVDEIVFDMNNDVDELLPVEVKEQRLSNLLQALMVAACVGAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKLLEEYHANFVESVPFKAVAMFTIFQTTYLLLCFGITWIPIAGVLFPLLIMLLVPIRQYILPMFFKGAHLQELDAAAYEEAPANAFNMSFEDLHSQATTVNITGGEILDEIITRSRGEIRRTHSPKTTSSTPTSSGDIRPANSPQLSRRIPSPRISELRGESSQGAIGKEIMLK 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g1142 702 Gene3D Helical hairpin bin 18 60 - -
Lal4g1142 702 PANTHER ANION EXCHANGE PROTEIN 1 691 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lal4g1142 702 PANTHER BORON TRANSPORTER 2-RELATED 1 691 - -
Lal4g1142 702 MobiDBLite consensus disorder prediction 652 678 - -
Lal4g1142 702 MobiDBLite consensus disorder prediction 646 702 - -
Lal4g1142 702 Pfam HCO3- transporter family 462 552 IPR011531 GO:0006820|GO:0016021
Lal4g1142 702 Pfam HCO3- transporter family 7 184 IPR011531 GO:0006820|GO:0016021
Lal4g1142 702 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g1142 Lal-Chr4 14851820 14857115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g1142 1 697 Antiporters AT3G62270 73.888 0.0 1046
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g1142 K24194 - gmx:100793554 1233.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g1142 4 14851820 14857115 Lal4g1142 4 14851820 14857115 ECH
Lal21g0732 21 5979878 5985314 Lal4g1142 4 14851820 14857115 LSH