Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0899 ATGGCTGCCGGCGGCAATGTTTTGAGGCAGATTTTGCCGGAAGACGATGCAGCAGGTGAGCTGTACGTGCTTGCTCTAGATGATAGCCATGTTGATCGTAAGGTCATTGAACATTTGCTCAAAATATCTTCTTGCAAAGTTACGGAAGTCATCAGAACCATAATAGTGCGGCCACATCAACTGATATGTGACGGTGGTAGAGAGTGGAACAAGAGCTCTTCATTTCTAGGGTTGGATGGAGAGAACTGCTCCATAGATTTTGATAGTCTGAAGGTTAATCTGATAATGACTGACTATTCCATGCCCGGGATGACAGGATACGAATTACTCAAGAGGATTAAGGAATCATGTATTTTAAGACAGATTCCAGTGGTGGTTATGTCGTCTGAGAATATTTTGACCAGAATTGATAGTTGCTTGGAAGAAGGAGCAGAGGATTTTCTTTTGAAGCCCGTGAAGTTGTCAGATGTAAAACGATTAACAGATTTCATGAGAAGTGAAGGGAAGAAAGGAGAAAAAAGATAA 525 0.4171 MAAGGNVLRQILPEDDAAGELYVLALDDSHVDRKVIEHLLKISSCKVTEVIRTIIVRPHQLICDGGREWNKSSSFLGLDGENCSIDFDSLKVNLIMTDYSMPGMTGYELLKRIKESCILRQIPVVVMSSENILTRIDSCLEEGAEDFLLKPVKLSDVKRLTDFMRSEGKKGEKR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0899 174 PANTHER TWO-COMPONENT RESPONSE REGULATOR 73 170 IPR045279 GO:0009736
Lal4g0899 174 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 50 IPR045279 GO:0009736
Lal4g0899 174 Pfam Response regulator receiver domain 87 158 IPR001789 GO:0000160
Lal4g0899 174 SMART REC_2 21 161 IPR001789 GO:0000160
Lal4g0899 174 ProSiteProfiles Response regulatory domain profile. 22 165 IPR001789 GO:0000160
Lal4g0899 174 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR6 73 170 - -
Lal4g0899 174 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR6 17 50 - -
Lal4g0899 174 SUPERFAMILY CheY-like 88 160 IPR011006 -
Lal4g0899 174 CDD REC_typeA_ARR 23 160 - -
Lal4g0899 174 Gene3D - 23 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0899 Lal-Chr4 9135961 9138261 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0899 21 162 Response Regulator Gene Family AT5G62920 65.493 9.32e-59 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal4g0899 Response_reg 9.1e-15 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0899 K14492 - gmx:100306152 220.705