Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0811 ATGGCAGTTACACCCAGCCACACCATCAAGATTCTCTATAGCTACGGCGGCAAGATTCTCCCACGCGCCACGGACGGTGAACTCCGTTACGTTGGTGGCTACACTAGAATTCTCACCGTCGATCGTTCCATTTCCTTTTCAGAATTGATGGTGAAACTGGGAGAATTGTGCGGTTCCTCTATGATTTTACGGTGTCAATTGCCAAATGGAGATTTAGAAACCCTAATTTCAATAAAAAACAACGATGATTTGGAGAATATAATCGAAGAATACGATCGTGCTTCATTGAAATTACTGCATCCGTTGAAGATTAGAGTCGTTCTATCACCACCGAGATCGCTCAAGAAAGTGTCTCCTTCGACGTCGTCTTCTTCCACCAGCACCGCTCCCTCTACCTCTAAATCACCTCATAACTCCACTGATTCTCTGCCGTATGTAGCGGCTGCGTATCGGATCTCCTGCCAGAACCGTTCACCGGTGTTCGGGTATCCAATCCGCATCCATAATGTTGCGGCTAAAGCGAGTTGCTACAACGGACAGTTTGATAAAAACAGTAGATTTCTCTACCGTGGGCCCTACTGCAACAATTACTGCCACTAA 600 0.4633 MAVTPSHTIKILYSYGGKILPRATDGELRYVGGYTRILTVDRSISFSELMVKLGELCGSSMILRCQLPNGDLETLISIKNNDDLENIIEEYDRASLKLLHPLKIRVVLSPPRSLKKVSPSTSSSSTSTAPSTSKSPHNSTDSLPYVAAAYRISCQNRSPVFGYPIRIHNVAAKASCYNGQFDKNSRFLYRGPYCNNYCH 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0811 199 Pfam PB1 domain 27 98 IPR000270 GO:0005515
Lal4g0811 199 SUPERFAMILY CAD & PB1 domains 25 113 - -
Lal4g0811 199 MobiDBLite consensus disorder prediction 114 140 - -
Lal4g0811 199 MobiDBLite consensus disorder prediction 113 140 - -
Lal4g0811 199 CDD PB1_UP2 14 108 - -
Lal4g0811 199 Gene3D - 29 109 - -
Lal4g0811 199 PANTHER PB1 DOMAIN PROTEIN 6 199 - -
Lal4g0811 199 SMART PB1_new 23 109 IPR000270 GO:0005515
Lal4g0811 199 PANTHER OS05G0427100 PROTEIN-RELATED 6 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0811 Lal-Chr4 6863673 6866495 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0811 7 93 MAP Kinase Kinase Kinase AT5G57610 50.575 2.02e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0811 - - gmx:100797123 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0811 4 6863673 6866495 Lal4g0811 4 6863673 6866495 ECH
Lal19g1054 19 14314731 14318403 Lal4g0811 4 6863673 6866495 PCT
Lal4g0811 4 6863673 6866495 Lal19g1054 19 14314731 14318403 PCT