Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0743 ATGCGGTTTTTGGCACATATGCAAAATTTCTACGGGGTTATTTTTATTGAGATGGCTGATGAAATGAATAATAATGGTGAAAACTATGAGGGTGTAGATGACATTGATGTTAGTGAAGATGGAAATATTAATGAAGTAGAGGAATTTGATTTTGAAGAAATTGATTTTGGATCATTAAACGAAGATGAAGTAAAAAAATATAGAGAGGGATTTAGGGATAAGAAAAATGAATTAGTTCGAAAAAGGGCTCCAAGAAAAGAAACGAGATGTAGTTGTTTAGCAAGAATGAAAATTTACATTGACAAGGAGAAAAGTGATTGGTATGTGAGTTGTTTTGTTGATGATCATAATCATGAATTGGTTGGCGAACATTATGGCAGGATGATAGCGTCAAACCGAAGTATGACAGAAATAGACGTCGCTTTGATGAACACAATGAGAGAAGTCGGAATTGGAACAAGCAAAATTTTTGGTTCATTCGCTGAAACAAAGAAGAATAGGAATGATGACGCAGAATCAGCATTACAATACTTGAAGGAACAATCAAAATCAGATTCTGCAATGTATTGGAGACATAGTGTAGATGAAGAAGCTTTTGATGCAATCTATGGTCGAAACAAATACAAGTTTCCAGTGGTCATTTTTTCTGGTGTGAACCATCACAAGCAAACAACAGTATTTGCTGCTGGTATTGTGTCTAACGAGACAGAGGAAACTTACTTTTGGCTTCTAGGAAATTTCTTGGAGGCAATGAATGGGAAACATCCAAAGTGTGTTATCACTGATGGTGACTTTGCGATGAAGAATGCAATCAAAAGAGTTTTCCCTGCAGCTCATCATAGACTATGTGCTTGGCATATATGTAACAATGCTGGGAAAAATATAAAGAAGAATAACTTTCATAAGGACTTCCAGAAAGTTATGTATGCTGATGTTGAGATTGATGATTTTAATATGATGTGTGAGGAACTTATTGCAAAACATGGACTTCATAATAATGTTTGGGCATCTCAGATATTTGATTGCAGATGTATGTGGGCTAGGTCATATATTCGAGGAAAGTTCTATGCTGGTTTGCATACGACATCACGTTGGGAGGGATTACATTCACAAATGGGGAGTTACATGAGGAACAATGAGGTGGTGGAAGATTTTAAATCTTCGTATGGTGATGAGTTGTTACAAACTCATTATCATAATTTAGAGGGTCATGCTGCTTCGATATATACTAGAGTTGTTTTCAAAGAATTTCGTGAAATTTTATTGGAAGCTGCAAAATTAAGGATAATTTCTTCCCAACAAACGTCAAGTCTTGTCATATACAATATTGGGAAGCATTATACTCCGAACAAGAAATGGCATGTATCACATTATCATAATGGTAGTAATGTGGACATTAAATGCTCGTGTAGACGGATGGAATATTTTGGGATGCCATGCAGTCATAATGTTTTTGTGTTACTAATTTTGGACATATCACAATTGCCATCTTGTTTGGTTCTTGAAAGGTGGACAAAGAAAGCAAAAAATGTTGAAAGTGTTAATTTTCAACAGTGCGAGTTAAGTAGAGAATCAGTTAAAAGCAGTAGATATGGAGCTTTGAGTGATGCTTGTAGGGTGTTATGTAACCTTGCTTGCGAAACGGAGGAAGACTTTTCAGAGATGCTAGAAAAAGTTTATAACGAATGTGGTAGACTCCGATCAAAACAACACTCTAGTTCGATGGAAAATGTTGACAATGCCACTGTAGATCAATTTATATTTGACTCTAATATTGGAATGTTACAATTGCAATAA 1797 0.3534 MRFLAHMQNFYGVIFIEMADEMNNNGENYEGVDDIDVSEDGNINEVEEFDFEEIDFGSLNEDEVKKYREGFRDKKNELVRKRAPRKETRCSCLARMKIYIDKEKSDWYVSCFVDDHNHELVGEHYGRMIASNRSMTEIDVALMNTMREVGIGTSKIFGSFAETKKNRNDDAESALQYLKEQSKSDSAMYWRHSVDEEAFDAIYGRNKYKFPVVIFSGVNHHKQTTVFAAGIVSNETEETYFWLLGNFLEAMNGKHPKCVITDGDFAMKNAIKRVFPAAHHRLCAWHICNNAGKNIKKNNFHKDFQKVMYADVEIDDFNMMCEELIAKHGLHNNVWASQIFDCRCMWARSYIRGKFYAGLHTTSRWEGLHSQMGSYMRNNEVVEDFKSSYGDELLQTHYHNLEGHAASIYTRVVFKEFREILLEAAKLRIISSQQTSSLVIYNIGKHYTPNKKWHVSHYHNGSNVDIKCSCRRMEYFGMPCSHNVFVLLILDISQLPSCLVLERWTKKAKNVESVNFQQCELSRESVKSSRYGALSDACRVLCNLACETEEDFSEMLEKVYNECGRLRSKQHSSSMENVDNATVDQFIFDSNIGMLQLQ 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0743 598 Pfam FAR1 DNA-binding domain 67 121 IPR004330 -
Lal4g0743 598 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 68 157 IPR031052 GO:0006355
Lal4g0743 598 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 199 570 IPR031052 GO:0006355
Lal4g0743 598 Pfam MULE transposase domain 199 290 IPR018289 -
Lal4g0743 598 ProSiteProfiles Zinc finger SWIM-type profile. 453 491 IPR007527 GO:0008270
Lal4g0743 598 Coils Coil 161 181 - -
Lal4g0743 598 Pfam SWIM zinc finger 462 488 IPR007527 GO:0008270
Lal4g0743 598 PANTHER OS02G0262500 PROTEIN 199 570 - -
Lal4g0743 598 PANTHER OS02G0262500 PROTEIN 68 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0743 Lal-Chr4 6186727 6189396 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal4g0743 MULE 9.5e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0743 - - lang:109350553 554.288