Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0717 ATGGAATGTAATAAAGATGATGCTTTGAAGGCTAAAGAGATTGCAGAAGAGAAGCTTTTAAAGAAGGACTATGGCGGGGCAAAGTTATTTGCATTGAAGGCTCGAAACTTGGATCCCAATCTTGTTGGGCTTTCTCAATTGCTGGCAGCAATTGCGGTGAATATCTCTGCTGAAAGAAGAGTTAATGGACAAGTTGATTGGTACGGTGTTCTTGGCGTGCAACCCTTCGCTGATGATGCAACGATTCGATGTTGTTATCGGAAACTGGCTCTTATGCTGCACCCAGATAAAAATAAATCTGTAGGTGCAATTGACGCATTTAAGCTAATCACACAGGCATGGAGTTTATTATCTGATAAAGACAAGAAAGTCGTCTATGACCAAAACCGAAATTCATCAGGTAGACATGAAGAAATTCAAGGTATGAAACCTTCTGTACCAGCTCGTCAGAATGGTTTCTGTAATAATAATATTATAAATACTGCTAACCACAAGGATAGAGATCATAAGAATGGGACTCATCCCATTCCTATTCCAGTATCTCCCGTGACATTGAAACGAACATTTTGGACCAGGTGTGATTCCTGCAAGACACAATTTGAGTACTATACTCTTTATATCAACCGTGAACTTATCTGTGCGGGTTGCCAAAAGCAATTTTTGGCTCATGAGGCACCACCCCCACCTGTATACAGAAATGGTTCGTCCATGTCAAGAATTTCTCAGGTGAAGCAACATAACTTCAACTCAACCAGAACTGAAAGAAGCTGCCATGCTTCAGGAAGGACCCCAATGTATGCAGTCAACTCATCACTTGCGTCAGGTCATTTCTCTACGTCTGGTGGTATTTCCAGTGCACCTACACCAGCTTCTGCTGCTGCTGAAGCTCCTGGTGTCTATGGAATGCCATCTGTGGATTTGAAGAGACGGCGTGAAGTTGCAACACCTGTCGTCGGGGAAGAGGGCCATTTTGGAAAAACTCATGCTGTTGTGGGGAATGTTTCTGGTCCAGCTTTGAAGTCCTGTTTAGGTCCAAATTCTGTTTTCATAGGAGATAGTTCAAGGAAAATAAGGCGCACAAATGAAAATCAAGTACATGGTGATGGAAGAGAGAGGGAAACCAAAATTGCATATGAAAAAGGAGGAATAAGATTGCCTAATGAGTTCGGGTCTCAAAAGGATCATTTGGATAATCGAGGAAGGGCTAATGCTGCTGGAAATTACAAACGGAATGGTGCTAGGGAAGTATCACAACTGAAAATGAAGACCATGTTGATGGATATGGCTCGAAAGGACATTCGTAAAAATCTTGATGGGTGGATTAATTCTTCTGTAGCAAAGAATTTAGAAAAACCAAAGAATACTAATGCAGAAGTCAGAGAGAAGAACAAAGAGACGGCTATAAGCGGGGTAAAACATGCTGCCCCAGAATTTGTTGATTCTGAGGCCATAGACAATAAGTATTTCTCTACTGACTCAAAAATAACTGAGTCTCTCACAATGAGTGTTCCAGACCCAGATTTCCATGATTTTGATGGAGACCGTATCGAAAATGCCTTTCGTGAGAATGAAGTTTGGGCTGCTTATGATGATGATGATGGCATGCCACGCTTCTATGCTTTAATCAACTGTGTAATTTCAAAGAAACCTTTCAATATGAGGATTAGTTGGCTTAGCTCTAAGACCAATGATGAATTGGCCCCAATTAACTGGGTCAGTGCTGGCTATGCCAAGACTGTTGGGGATTTACGAATTGGCAAGCGTGAACTTTCTACTACTCTTAATTCCTTTTCGCACAGGGTCAAATGGACTAAAGGTCCAAGAGGGCTTATACATATATATCCTAAGAAGGGAGACGTTTGGGCTTTGTATCGAAACTGGTCTGTTGAATGGAATGAATTTACTGAAGATGAAATCATACATAAGTATGACATGGTGGAAGTGCTTGATGACTACAGCGACGAGGGAGGTGTAAATGTTGCTCCGCTTGTAAAAGTTGGAGGTTTCAAGACTGTATTCCACCGGAATGCAGATCCAGGAAAAGTCAGGAATATTCCAAAGGCGGAGATGTTTCGTTTCTCACACCAGGTACCTTCATACTTGCTTACTGGTCAAGAAGGTCATAATGCTCCTAGTGGTTGCTTGGAGCTTGATCCAGCAGCTACACCCATGGAACTTCTCCAAATAACCACAGAAGAAGCTCCGGAACAAGAAATGACAACTGAGAAATCTTCAGAAGATGAACCGAAGCCCAATGTGACTTCTAGGGAGGATGCTGTTGAAGATGTTCCGAGAAAAGTGGTGGCTGAAACAATCAAGAGGAACGAAGGCAGGCCTGAGGTTTTTTTAGTATACAAGCGGAGACGTTCGAAGAAATGA 2379 0.4216 MECNKDDALKAKEIAEEKLLKKDYGGAKLFALKARNLDPNLVGLSQLLAAIAVNISAERRVNGQVDWYGVLGVQPFADDATIRCCYRKLALMLHPDKNKSVGAIDAFKLITQAWSLLSDKDKKVVYDQNRNSSGRHEEIQGMKPSVPARQNGFCNNNIINTANHKDRDHKNGTHPIPIPVSPVTLKRTFWTRCDSCKTQFEYYTLYINRELICAGCQKQFLAHEAPPPPVYRNGSSMSRISQVKQHNFNSTRTERSCHASGRTPMYAVNSSLASGHFSTSGGISSAPTPASAAAEAPGVYGMPSVDLKRRREVATPVVGEEGHFGKTHAVVGNVSGPALKSCLGPNSVFIGDSSRKIRRTNENQVHGDGRERETKIAYEKGGIRLPNEFGSQKDHLDNRGRANAAGNYKRNGAREVSQLKMKTMLMDMARKDIRKNLDGWINSSVAKNLEKPKNTNAEVREKNKETAISGVKHAAPEFVDSEAIDNKYFSTDSKITESLTMSVPDPDFHDFDGDRIENAFRENEVWAAYDDDDGMPRFYALINCVISKKPFNMRISWLSSKTNDELAPINWVSAGYAKTVGDLRIGKRELSTTLNSFSHRVKWTKGPRGLIHIYPKKGDVWALYRNWSVEWNEFTEDEIIHKYDMVEVLDDYSDEGGVNVAPLVKVGGFKTVFHRNADPGKVRNIPKAEMFRFSHQVPSYLLTGQEGHNAPSGCLELDPAATPMELLQITTEEAPEQEMTTEKSSEDEPKPNVTSREDAVEDVPRKVVAETIKRNEGRPEVFLVYKRRRSKK 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0717 792 SMART dnaj_3 65 122 IPR001623 -
Lal4g0717 792 PANTHER BNAC03G44070D PROTEIN 1 750 - -
Lal4g0717 792 SUPERFAMILY Chaperone J-domain 59 130 IPR036869 -
Lal4g0717 792 Pfam Domain of unknown function (DUF3444) 499 706 IPR024593 -
Lal4g0717 792 MobiDBLite consensus disorder prediction 736 764 - -
Lal4g0717 792 Gene3D DnaJ domain 52 146 IPR036869 -
Lal4g0717 792 Pfam DnaJ domain 66 127 IPR001623 -
Lal4g0717 792 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lal4g0717 792 PANTHER HEAT SHOCK PROTEIN-LIKE 1 750 - -
Lal4g0717 792 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lal4g0717 792 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lal4g0717 792 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lal4g0717 792 CDD DnaJ 66 119 IPR001623 -
Lal4g0717 792 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lal4g0717 792 MobiDBLite consensus disorder prediction 733 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0717 Lal-Chr4 5867631 5870009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0717 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.741 2.40e-22 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0717 - - lang:109358929 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0841 17 6313154 6315454 Lal4g0717 4 5867631 5870009 LSH