Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0709 ATGGAACCAACATGTGTGGATACTTCTCTCAACCTTAACGTTATTCCCTCTCAGCACATTGACTTAGCGGTTTTGGTTGAAGAGTTGCACCGTCTAAATAGTGAGAAAAAGAGACTTACTGAAACATTGAACCAAGTGTGTGAGAATTATGATGCTTTGCAAAGGCATTTGAGCCAATTGAGGGAAAAAGATATTGAAAAAGAAGAAGTACCATTGCATAAGAGAAAGGATTGTATGAATATGTTTGGTATTAGTTCCTTTACTGAGTGTAGCACTATTACTGAGGAAGAGTCATTCAAAAGGCCCAGGAATAATAATAACAACTCGTCTAAGGTTTCTAAGGTTCTTGTTCGAACAGAAGCATCTGATACTAGCTTATATGTGAGAGATGGATATCAATGGAGAAAATACGGTCAGAAAGTTACAAGGGATAACCCTTCTCCTAGGGCTTACTTTAAGTGCTCCTATGCCCCAACCTGCCCTGTCAAAAAGAAGGTGCAAAAAAGTTTAGAAGACCAAACTATATTGGTGGTAACTTATGAAGGAGAGCATAACCATGGCAATGACCAAGCTGAGATAACACTGAGTTCAACAAGCCAAAGTGAAAGACAAGCAGAGTTAGTTCCTATTTCTTCAGCCATGGTTAGGAGTGCAACTAGTCCAAGTGTAACACTTGACTTGGTCCAATCAACAGTTATTAACAATAATGCACAAAAGTCATCAATCCAAAAGTTGTTAATTCAACAAATGGCAACTTCTTTGACAAGAGATCCCAATTTCACATCAGCACTTGCTACTGCAATTTCAGGAAGGATTCTAGACCACACTAATTCTATGGAGTAA 843 0.3843 MEPTCVDTSLNLNVIPSQHIDLAVLVEELHRLNSEKKRLTETLNQVCENYDALQRHLSQLREKDIEKEEVPLHKRKDCMNMFGISSFTECSTITEEESFKRPRNNNNNSSKVSKVLVRTEASDTSLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSYAPTCPVKKKVQKSLEDQTILVVTYEGEHNHGNDQAEITLSSTSQSERQAELVPISSAMVRSATSPSVTLDLVQSTVINNNAQKSSIQKLLIQQMATSLTRDPNFTSALATAISGRILDHTNSME 280
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0709 280 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 274 IPR044810 GO:0003700
Lal4g0709 280 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 274 - -
Lal4g0709 280 Pfam WRKY DNA -binding domain 130 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal4g0709 280 SUPERFAMILY WRKY DNA-binding domain 125 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal4g0709 280 Gene3D WRKY domain 111 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal4g0709 280 ProSiteProfiles WRKY domain profile. 130 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal4g0709 280 Coils Coil 22 63 - -
Lal4g0709 280 SMART WRKY_cls 128 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal4g0709 Lal-Chr4 5771012 5773095 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0709 6 276 WRKY Transcription Factor Family AT1G80840 42.424 1.09e-71 221
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal4g0709 WRKY 1.7e-23 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0709 - - gmx:100127373 353.214