Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal4g0709 | ATGGAACCAACATGTGTGGATACTTCTCTCAACCTTAACGTTATTCCCTCTCAGCACATTGACTTAGCGGTTTTGGTTGAAGAGTTGCACCGTCTAAATAGTGAGAAAAAGAGACTTACTGAAACATTGAACCAAGTGTGTGAGAATTATGATGCTTTGCAAAGGCATTTGAGCCAATTGAGGGAAAAAGATATTGAAAAAGAAGAAGTACCATTGCATAAGAGAAAGGATTGTATGAATATGTTTGGTATTAGTTCCTTTACTGAGTGTAGCACTATTACTGAGGAAGAGTCATTCAAAAGGCCCAGGAATAATAATAACAACTCGTCTAAGGTTTCTAAGGTTCTTGTTCGAACAGAAGCATCTGATACTAGCTTATATGTGAGAGATGGATATCAATGGAGAAAATACGGTCAGAAAGTTACAAGGGATAACCCTTCTCCTAGGGCTTACTTTAAGTGCTCCTATGCCCCAACCTGCCCTGTCAAAAAGAAGGTGCAAAAAAGTTTAGAAGACCAAACTATATTGGTGGTAACTTATGAAGGAGAGCATAACCATGGCAATGACCAAGCTGAGATAACACTGAGTTCAACAAGCCAAAGTGAAAGACAAGCAGAGTTAGTTCCTATTTCTTCAGCCATGGTTAGGAGTGCAACTAGTCCAAGTGTAACACTTGACTTGGTCCAATCAACAGTTATTAACAATAATGCACAAAAGTCATCAATCCAAAAGTTGTTAATTCAACAAATGGCAACTTCTTTGACAAGAGATCCCAATTTCACATCAGCACTTGCTACTGCAATTTCAGGAAGGATTCTAGACCACACTAATTCTATGGAGTAA | 843 | 0.3843 | MEPTCVDTSLNLNVIPSQHIDLAVLVEELHRLNSEKKRLTETLNQVCENYDALQRHLSQLREKDIEKEEVPLHKRKDCMNMFGISSFTECSTITEEESFKRPRNNNNNSSKVSKVLVRTEASDTSLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSYAPTCPVKKKVQKSLEDQTILVVTYEGEHNHGNDQAEITLSSTSQSERQAELVPISSAMVRSATSPSVTLDLVQSTVINNNAQKSSIQKLLIQQMATSLTRDPNFTSALATAISGRILDHTNSME | 280 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal4g0709 | 280 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 1 | 274 | IPR044810 | GO:0003700 | |
Lal4g0709 | 280 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 1 | 274 | - | - | |
Lal4g0709 | 280 | Pfam | WRKY DNA -binding domain | 130 | 186 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lal4g0709 | 280 | SUPERFAMILY | WRKY DNA-binding domain | 125 | 187 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lal4g0709 | 280 | Gene3D | WRKY domain | 111 | 188 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lal4g0709 | 280 | ProSiteProfiles | WRKY domain profile. | 130 | 189 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lal4g0709 | 280 | Coils | Coil | 22 | 63 | - | - | |
Lal4g0709 | 280 | SMART | WRKY_cls | 128 | 188 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal4g0709 | Lal-Chr4 | 5771012 | 5773095 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal4g0709 | 6 | 276 | WRKY Transcription Factor Family | AT1G80840 | 42.424 | 1.09e-71 | 221 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Lal4g0709 | WRKY | 1.7e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal4g0709 | - | - | gmx:100127373 | 353.214 |