Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0691 ATGGCAGCTTTTTCATACCAATACCTTCCTTTTCTTGTTGACTCATCAGCATTTTTTCCTAATATAAACACTGGTTTACCTAATTCTCAGTTTCATCAGAAAACCTCTTTTGATGTCACAAATCATGAGATTAGCAGTGTTGATCAAAGCTCCAAGATTACTATAACTGACAATGAACCTTCTGTGACCAAAAACATTACTCCTCAGTCCTCCATGGTAGTAGATAATAAGCTTGAAAATGGTGAACAGGTTACTCAAAATATGACCCCTATGGTGAAGAAAAGGAGAGTCAGAAGTGTATCTTCCTTAAGTAACCCTCAATCTAAGGATGCAAGTGAAGGGAAAAACAAGAGACAGAGGAAGAACAACAATGGTGGGGTGAAAGGAGAGGAAAAGGCAAAAGCAGTAAAGAAGGATCAGAAGAAAAATTGTGAAGAGCCCCCAAAGGGGTATATCCACGTTAGAGCAAGAAGGGGTCAAGCAACTGATAGCCACAGCCTTGCTGAAAGGGTTAGAAGAGAGAAAATAAGTGAAAGGATGAAGATGTTGCAAAGACTTGTGCCAGGATGTGATAAGTTGACTGGAAAGGCCCTTATGCTGGATGAAATAATCAATTATGTTCAATCTTTACAAAATCAAGTTGAGTTTTTGTCAATGAAGCTTGCTTCTACAAACCCCATGTTCTATGACATGGCAACAGACCTAGACACCCTTTTGGTTAAACCAGAGAAATTGAATAGCATTGCAGCACCATCACCACTGCAATCTGTGCAACAATGCAACAGCACCAACCAAGTAACAGGTTTTTCTAATACAGCCAATACCATGACCCACACAACCATTTCTCCAACTCCTAATACTGACTATCTTTTGGATAATTCAACTTCAGTTTTTCTTCAAGGGCAGAGGCCAAATGTCCTCTTTGAGGATATAGGTAGTCATTTTTGGGACGCAGAAGATCAACGACAAAAGTTTATTCATCCATATGGATTCAGCAACAACTTTTGTTCCTTTCATTGA 1020 0.3922 MAAFSYQYLPFLVDSSAFFPNINTGLPNSQFHQKTSFDVTNHEISSVDQSSKITITDNEPSVTKNITPQSSMVVDNKLENGEQVTQNMTPMVKKRRVRSVSSLSNPQSKDASEGKNKRQRKNNNGGVKGEEKAKAVKKDQKKNCEEPPKGYIHVRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKLTGKALMLDEIINYVQSLQNQVEFLSMKLASTNPMFYDMATDLDTLLVKPEKLNSIAAPSPLQSVQQCNSTNQVTGFSNTANTMTHTTISPTPNTDYLLDNSTSVFLQGQRPNVLFEDIGSHFWDAEDQRQKFIHPYGFSNNFCSFH 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0691 339 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 160 210 IPR011598 GO:0046983
Lal4g0691 339 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 339 IPR024097 GO:0006355
Lal4g0691 339 CDD bHLH_AtBPE_like 150 235 - -
Lal4g0691 339 SMART finulus 166 216 IPR011598 GO:0046983
Lal4g0691 339 MobiDBLite consensus disorder prediction 111 149 - -
Lal4g0691 339 PANTHER BASIC HELIX LOOP HELIX PROTEIN BHLH8 1 339 - -
Lal4g0691 339 MobiDBLite consensus disorder prediction 79 110 - -
Lal4g0691 339 Pfam Helix-loop-helix DNA-binding domain 164 211 IPR011598 GO:0046983
Lal4g0691 339 Gene3D - 157 230 IPR036638 GO:0046983
Lal4g0691 339 MobiDBLite consensus disorder prediction 79 149 - -
Lal4g0691 339 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 158 227 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0691 Lal-Chr4 5468426 5471855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0691 99 243 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 63.014 3.54e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal4g0691 HLH 2.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0691 - - gmx:100806696 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0691 4 5468426 5471855 Lal4g0691 4 5468426 5471855 ECH