Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0689 ATGAAGTTTCCAACATGGAACTTCAACACCATTGCAACAATGGCTGCAATGTTTCTTCATCTTGTGGTGTTCTCTCTTTCTTCTTCATCTCATCATGCAGATAGCATTGCTTCCCTTCCTGGCCAACCACCCCATATAAACTTTCAACATTTTTCAGGATATATCACACTTGATCACAACAAACATAAATCTCTTTTTTACTATTTTGTTCAATCTCAAACTCTTCCTCATTCAAACCCTCTTGTTCTTTGGCTCAATGGAGGACCTGGTTGTTCATCTTTGGGAGTAGGAGCATTCTCTGAAAATGGACCCTTTAGACCAAATGGAGAATTTCTTATTCAAAATGAGTATAGTTGGAATAGAGAGGCAAACATGTTGTATTTGGAGACACCAGTAGGAGTAGGGTTCTCTTATGCTAAAGGTAGCTCCTCTTATATGACAATGAATGATGAAGAAACAGCCAGGGACAATATTGCATTTTTGCAAGGTTGGTTCAACAAGTTCCCTCAATATAGGAACAGAGATTTGTTTCTAACTGGTGAAAGTTATGCAGGGCATTATGTTCCTCAGCTGGCTAAGCTAATGATTGAAATGAACAGAAAGAACAAGATATTCAATCTAAAAGGAATAGCATTAGGTAATCCAGTTCTAGAATATGCTGCTGATTTCAATTCAAGGGCTGAGTTTTTCTGGTCTCATGGACTAATATCAGATTCAACATACAACATGTTCACTAAAGTGTGCAACTATTCTCTATATGTCAGTGAATACTATAGAGACTCAGTTTCACCTCTTTGTTCAAAGGTTATGGGACAAGTGAGCAAAGAAACAAGTAAATTTGTGGACAAATATGATGTCACACTTGATGTTTGCATTTCCTCAGTACTTTCACAATCCAAGGTTATTTGTCCTCAAACTCAAATCCAAGTGAGTTTTCTATCCTGGACTTGCCCTTCTCATTTTGTTAGTTCTCCTCATTTTGTTTACTATAAACTTTTGGTAACCGAGGATGAGTTCGGCGCAACGCAGCAAGCAAGTGAGAGGATAGATGTATGTGTAGATGACAAGGTTACTAATTACCTAAACAGAAGAGATGTACAAGATGCACTTCATGCCAAGCTTGTTGGAGTTCGAAAGTGGGATGTCTGCAGCAACATCCTAGATTACAATATGCTCGATTTGGAAGTGCCTACACTTCCTATTGTTGGATCACTTATAAAAGCTGGAGTTAGGGTCTTAATTTACAGTGGAGATCAAGATTCGGTAATTCCATTGACCGGAAGCCGCAGCTTGGTTCAAAAGTTGGCAACACAATTAGGACTGAATACAACCATTCCATACAGAGTATGGTTTGGAGGTCAACAGGTTGGAGGGTGGACTCAAGTTTATGGCAATATCCTCTCATTTGCCACAGTTCGCGGTGCCGCCCATGAAGTCCCCTTCTCGCAGCCGGAAAGATCACTTGTGCTATTCAAATCATTCTTGGAAGGAAGGCCTTTACCTGAAAATTTTTAA 1515 0.3941 MKFPTWNFNTIATMAAMFLHLVVFSLSSSSHHADSIASLPGQPPHINFQHFSGYITLDHNKHKSLFYYFVQSQTLPHSNPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEFLIQNEYSWNREANMLYLETPVGVGFSYAKGSSSYMTMNDEETARDNIAFLQGWFNKFPQYRNRDLFLTGESYAGHYVPQLAKLMIEMNRKNKIFNLKGIALGNPVLEYAADFNSRAEFFWSHGLISDSTYNMFTKVCNYSLYVSEYYRDSVSPLCSKVMGQVSKETSKFVDKYDVTLDVCISSVLSQSKVICPQTQIQVSFLSWTCPSHFVSSPHFVYYKLLVTEDEFGATQQASERIDVCVDDKVTNYLNRRDVQDALHAKLVGVRKWDVCSNILDYNMLDLEVPTLPIVGSLIKAGVRVLIYSGDQDSVIPLTGSRSLVQKLATQLGLNTTIPYRVWFGGQQVGGWTQVYGNILSFATVRGAAHEVPFSQPERSLVLFKSFLEGRPLPENF 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0689 504 Gene3D - 352 388 - -
Lal4g0689 504 SUPERFAMILY alpha/beta-Hydrolases 36 501 IPR029058 -
Lal4g0689 504 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Lal4g0689 504 Gene3D alpha/beta hydrolase 28 317 IPR029058 -
Lal4g0689 504 Pfam Serine carboxypeptidase 40 497 IPR001563 GO:0004185|GO:0006508
Lal4g0689 504 Gene3D - 398 497 - -
Lal4g0689 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Lal4g0689 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Lal4g0689 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Lal4g0689 504 PRINTS Carboxypeptidase C serine protease (S10) family signature 467 480 IPR001563 GO:0004185|GO:0006508
Lal4g0689 504 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 29 502 IPR001563 GO:0004185|GO:0006508
Lal4g0689 504 PANTHER CARBOXYPEPTIDASE 29 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0689 Lal-Chr4 5415377 5418992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0689 360 500 Calmodulin-binding Proteins AT2G22960 26.950 2.52e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0689 K16297 - gmx:100795668 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0689 4 5415377 5418992 Lal4g0689 4 5415377 5418992 ECH