Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0679 ATGGATTCTGATGCATTCACCACTGCCTTATTCGAATGGGACCCACGCACTGTCCTTCCATCTGTTCCACCACTCACCACCCGCTCCCAACTTCTTGACTACACAGTGGCTCCGCCGAGGGAGATGGAAGAGCTGTTCCAATCATATGGAATACGGTGTTACACGGCGGCGAAGATAGCAGAGCTTGGTTTCACGGTGAGCACACTGGTGGATATGAAAGATGATGAACTTGATGATATGATGAACAGTCTCTGTCAGATTTTTCGATGGGATCTTCTTGTTGGAGAGCGTTACGGTATCAAAGCTGCAGTTAGGGCTGAACGACGTCGTATTGAGAGTGAAGACATGAAAAGGTGCAAGTTCCTTCTTTCCACTGTCACCACCACCAACTCTATTGATGCTCTTTCTCAAGAAGGTTTGTGGGAGGAGGTGGTGGGGAGCACGTGGGAGATGGTTGCTATGGAGAAGAAGAATAAGAAGCAAAGGAAGAGGTGGAGAGAAAAGATGAATGATGATGATGACGATGATGATGAGAAAGTAGAAGATGAAGAAGAAAATGAAGGGAAGAATATTAATGGTGGTGAAAGACAAAGAGAGCATCCTTTCATAGTGACTGAACCTGGTGAAGTAGCACGTGGTAAAAAGAACGGCCTTGATTATCTCTTTCATCTATATGAACAATGCCGTGAGTTCTTGATCCGGGTTCAGGTCATTGCTAAGGACCGAGGTGAAAAATGCCCCACCAAGGTGACAAACCAAGTGTTTAGGTACGCGAAGAAAGCAGGAGCAAGCTACATTAACAAGCCGAAAATGCGACATTACGTGCATTGCTACGCATTGCACTGTCTTGACGAGGATGTTTCAAATGAACTAAGGAGGGTTTTCAAGGAGAGAGGTGAGAATGTTGGAGCATGGAGACAAGCATGTTATAAACCCCTTGTAGCCATTGTAACACGTCAAGGTTGGGACATTGATGCCATTTTCAATTCTCATCCTCGTCTTTCCATTTGGTATGTCCCAACAAAGCTTCGTCAACTTTCTCATTCTGAGAGGAACAACGCCGCCATAGCTTCAACCTCTGTTGGCATTAACTGTTAG 1098 0.4545 MDSDAFTTALFEWDPRTVLPSVPPLTTRSQLLDYTVAPPREMEELFQSYGIRCYTAAKIAELGFTVSTLVDMKDDELDDMMNSLCQIFRWDLLVGERYGIKAAVRAERRRIESEDMKRCKFLLSTVTTTNSIDALSQEGLWEEVVGSTWEMVAMEKKNKKQRKRWREKMNDDDDDDDEKVEDEEENEGKNINGGERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIRVQVIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEDVSNELRRVFKERGENVGAWRQACYKPLVAIVTRQGWDIDAIFNSHPRLSIWYVPTKLRQLSHSERNNAAIASTSVGINC 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0679 365 PANTHER PROTEIN LEAFY 1 361 IPR002910 GO:0003677|GO:0006355
Lal4g0679 365 Pfam Floricaula / Leafy protein SAM domain 40 114 IPR035079 -
Lal4g0679 365 MobiDBLite consensus disorder prediction 185 199 - -
Lal4g0679 365 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 191 355 IPR035209 GO:0003677
Lal4g0679 365 Gene3D Protein LEAFY 192 361 IPR038276 -
Lal4g0679 365 MobiDBLite consensus disorder prediction 160 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0679 Lal-Chr4 5300989 5307752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0679 1 365 Orphan Transcription Factor Family AT5G61850 59.360 1.44e-147 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Lal4g0679 C_LFY_FLO 1.2e-104 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0679 - - gsj:114416001 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0679 4 5300989 5307752 Lal4g0679 4 5300989 5307752 ECH