Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal4g0652 ATGCAAGAGGAGAAGAAGATGAAGGTGAAGAAGGGTTGGCTTGCAGTTCAAGTGGGTTTAGAAGATGACCAATTTCAAGAAGGTGATTCTACTACTCAAAGATTTGTCATCCCTATCTCATATCTCTATCATCCACTATTCAAGCATCTTCTAGACAAAGCTTATGAGGTTTATGGATACCACACTGATGGTCCACTCAAGCTACCTTGTTCTGTCGATGACTTTGTTCATCTTCGTTGGCGAATTGAGAAAGAATCTAGTCACCATCAACATAATCATAATCATCATCATCCGCTTCATCATGCTTTATACTTCCACTCTTGTTAA 327 0.3914 MQEEKKMKVKKGWLAVQVGLEDDQFQEGDSTTQRFVIPISYLYHPLFKHLLDKAYEVYGYHTDGPLKLPCSVDDFVHLRWRIEKESSHHQHNHNHHHPLHHALYFHSC 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal4g0652 108 PANTHER SMALL AUXIN-UP RNA-RELATED 7 95 - -
Lal4g0652 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 95 IPR003676 GO:0009733
Lal4g0652 108 Pfam Auxin responsive protein 5 81 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal4g0652 Lal-Chr4 4933248 4933574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal4g0652 9 100 Calmodulin-binding Proteins AT3G43120 39.130 1.43e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal4g0652 K14488 - mtr:MTR_3g097120 168.318